| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2922 |
|---|
| Symbol | |
|---|
| ID | 4597423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3102500 |
|---|
| End bp | 3105286 |
|---|
| Gene Length | 2787 bp |
|---|
| Protein Length | 928 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639777527 |
|---|
| Product | copper-translocating P-type ATPase |
|---|
| Protein accession | YP_924111 |
|---|
| Protein GI | 119717146 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG3350] Uncharacterized conserved protein
[COG4633] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0854901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG TTGATGTTCT GGTCGTCGGC AGCGGTCTGG TACTGACCGC CCTGCTGGCC
GGGTTCTTCT TCGGTCCGAA GAAGACGAGC AGGGCTGCGG TCGGTGATGG CGTGCAGCTG
GTGACGGTCG TCGTGAAGGG CGGTTATAGC CCGGACACAG TCGAGGTCCG CGCCGGGATG
CCGGTGCGCC TGTCGTTCGA CCGGCAGGAG AGCGGGGACT GCTCGTCGCG GGTGGTGTTC
CCCGACTTCA AGATCAACCA GCTGCTGCCC GCCCACGAGA CGACGACGGT GGAGTTCCTT
CCTGAGGAGA CCGGTGAGTT CTCCTTCGCG TGCGGCATGA ACATGCTCCG CGGTCACATC
AGGGTCGTGG GCGGCGCTGA CGAGGATGGA GGCTCCGCGG TCGCGGTCGC GGTCGCGGTG
GCCGACCGCC CGCACGGTGA GGGAGCAACG GATGCCCACG TCCACGACCC GATCACGGCC
GAGCACGATC ACCACGTCGA CGGGAGAGCC CCGGTCGCGG CACCTGCTCT GGACCTGGTC
GGCGACTCCG AGGACCCGGA GGCGCGCGAG CGGGCGGCCG AGATCAAGGA CCTGGGCCAC
AGGGTCCTGC TCGGCGCGAT CCTGACCGTT CCGGTGCTGT TCGCTGTCAT GGCGGAGGAG
CTCTTCGGCG CCACCTGGGT CCCGTCGCTG CTGATGAACG ACTACATCCA GCTGGGGCTG
ATCGCCCCGG TGTTCCTCTA CACCGGCTGG CCCATCCACA AGACCGGATG GTTGGCGCTG
TCCCACCGGA CAGCGGACAT GAACTCGCTC ATCACGCTGG GCACCATCGC GGCCTTCGGC
TACAGCCTCG TGGTGACCTT CGCCCCGGCC GTCATCCCAG CGGATGCCCG CGAGGTGTAC
TACGAGGCCG TCGGTGTCAT CCTCACCCTG ATCCTGCTGG GCCGGCTGCT GGAGACCAAG
GCGAAGGCCG GGACCGGGGA GGCCATCCGC ACCCTGATCG GACTCCAGCC CCGCACCGCG
CGGGTGGTTC GCGGCGGCGA GGAGATGGAG GTCGCGATCG ACGAGGTCGT CGTGGGTGAC
GTCGTCGTCG TACGGCCCGG TGAGAAGCTG CCCGTCGATG GCGAGGTCCT GGACGGCAGG
TCCGCGGTGG ACGAGTCCAT GGTCACCGGC GAGCCGATCC CGGTCACGAA GACGGTCGGC
GACACGGTCA TCGGTGCCAC CATCAACCAG ACAGGGACGT TCCGGTACGC CGCCACGAAG
GTCGGCGCCG AGACGATGCT CGCGCAGATC ATCAGGTTGG TGCGAGAGGC GCAGGGCTCG
CGGGCCCCGA TCCAGCGGCT GGTGGACAAG GTCTCCAGCT ACTTCGTACC CGTGGTCATC
GCGATCGCGG TCTGGACCTT CGTCGTCTGG GCACTGGTCG GCCCGCCGCC GGCGTTCGTC
TTCGCCCTCG TCGCTGCCGT TTCCGTGCTG ATCATCGCGT GCCCCTGCGC CCTGGGACTG
GCCACACCGC TGTCGATCAC CGTCGGCACC GGCAAGGGCG CGACCGCGGG CATCCTGATC
CGCTCCGCAG AGGCGCTGGA GACGGCCCAC AAGCTCGACA CCGTGGTGCT CGACAAGACC
GGAACGATCA CGAAGGGCGC TCCTGCGCTC ACCGATGTGC TGCCCGCCGG AGGATTCACG
GAGGAGGAGC TGCTGACGCT CGTAGCCGCG GTGGAGCGGT CCTCAGAGCA CCCGCTGGCG
ACGGCAATCG TGTCCGGAGC GCTCGAGCGC GGGCTGGAGC TCCCGGAGAC CACGGCCTTC
GGGTCGGTGA CGGGCCAAGG TGTGCGCGCC TTGGTGGGCG GGCGTGAGGT GCTGGTCGGC
AACCACCGGA TGCTGGCGGC CGCAGGAGTC ACGGCCGATC GCGCTGACGG CAACCGGCTC
GCCAGCGACG GCAAGACGCC GATGCTGGCA GTCGTGGACG GCCGGTTCGC CGGCGTCATC
GGGGTCGCGG ACACTCTCAA GGACGGCTCT GCGGCGGCCG TCGCCGCGTT GCAGGCCCGC
GGGATCGACG TGGTGATGAT GACCGGGGAC AACCGGGCCA CCGCCGCCGC GATCGCCCGA
CAGGTGGGCA TCCGCCGGGT CGTGGCAGAG GTGATGCCGG AGCACAAGGC CGCAGAGGTC
CGGCGGCTCC AGGCCGAGGG CCGCGTCGTC GGCATGGTCG GTGACGGCAT CAACGACGCC
CCCGCGCTGG CGCAGGCGGA TGTCGGCTCG GCGATCGGCA CCGGCACGGA TGTGGCGATC
GAGTCCTCCG ACATCACGCT GATCTCTGGA GCGCTGTCCG GAGTGGTCAC CGCCGTGGAC
CTCTCGCGGG CCACCATGCG CAACATCCAC CAGAACCTGG TGTTCGCGTT CATCTACAAC
GGCTTGGGCA TCCCGATCGC CGCCGGTGTG TTGTACCCGG CGTTCGGTCT GACGCTGAGT
CCAATGCTCG CCGCGGCCGC GATGGCGCTG TCCTCGCTGT CCGTGGTGAC CAATGCCAAC
CGGCTGCGTG GGTTCACCCC GCGCGCCGTA GCCGACGTCG CCCAGGTTGC CGCCACCGAC
CCGGTGGTGG AAGTAGGGCG CGATGAAGAA CAGGAGGAGC CCATGTCCCA GAAGGTCACT
GACCCGGTGT GTGGGATGAG CATCGATCCG GCGTCCTCGG CGGCCAGCGC TGAGCACGAC
GGCAACACGT ACTACTTCTG CTCCACCCAC TGTGCGGAGA GCTTCAAGGC AGATCCGGCG
AAGTACGCCG GCGCGGTGGC GCAGTAG
|
|---|
| Protein sequence | MDLVDVLVVG SGLVLTALLA GFFFGPKKTS RAAVGDGVQL VTVVVKGGYS PDTVEVRAGM
PVRLSFDRQE SGDCSSRVVF PDFKINQLLP AHETTTVEFL PEETGEFSFA CGMNMLRGHI
RVVGGADEDG GSAVAVAVAV ADRPHGEGAT DAHVHDPITA EHDHHVDGRA PVAAPALDLV
GDSEDPEARE RAAEIKDLGH RVLLGAILTV PVLFAVMAEE LFGATWVPSL LMNDYIQLGL
IAPVFLYTGW PIHKTGWLAL SHRTADMNSL ITLGTIAAFG YSLVVTFAPA VIPADAREVY
YEAVGVILTL ILLGRLLETK AKAGTGEAIR TLIGLQPRTA RVVRGGEEME VAIDEVVVGD
VVVVRPGEKL PVDGEVLDGR SAVDESMVTG EPIPVTKTVG DTVIGATINQ TGTFRYAATK
VGAETMLAQI IRLVREAQGS RAPIQRLVDK VSSYFVPVVI AIAVWTFVVW ALVGPPPAFV
FALVAAVSVL IIACPCALGL ATPLSITVGT GKGATAGILI RSAEALETAH KLDTVVLDKT
GTITKGAPAL TDVLPAGGFT EEELLTLVAA VERSSEHPLA TAIVSGALER GLELPETTAF
GSVTGQGVRA LVGGREVLVG NHRMLAAAGV TADRADGNRL ASDGKTPMLA VVDGRFAGVI
GVADTLKDGS AAAVAALQAR GIDVVMMTGD NRATAAAIAR QVGIRRVVAE VMPEHKAAEV
RRLQAEGRVV GMVGDGINDA PALAQADVGS AIGTGTDVAI ESSDITLISG ALSGVVTAVD
LSRATMRNIH QNLVFAFIYN GLGIPIAAGV LYPAFGLTLS PMLAAAAMAL SSLSVVTNAN
RLRGFTPRAV ADVAQVAATD PVVEVGRDEE QEEPMSQKVT DPVCGMSIDP ASSAASAEHD
GNTYYFCSTH CAESFKADPA KYAGAVAQ
|
|---|
| |