| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2821 |
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| Symbol | |
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| ID | 4596111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2990635 |
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| End bp | 2991849 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777426 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_924010 |
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| Protein GI | 119717045 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.383501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACCG GGTTGTGGAG CCGGGTCAAC GGCCGCGCGC TCGCGGTCGC GGCCGCTGTC
GTGCTGCTGG CGGCGACGTA CTTCATCGTG CTGCGCGACG ACACCGCGAC CAAGACCGTG
AGCGCCCACT TCCCGCGGGC GGTCAGCATC TACGAGGGCA GCGACGTGCG GATCCTCGGC
GTGAACGTCG GCCGGGTGAC CGCGGTGACG CCGGAGGGCA ACTCCGTGCG CGTGGACATG
GAGTACGACG CGGAGTACCA GGTGCCGGCC GACGCCCAGG CCGTGATCGT GACTCCGACC
CTGGTCGCGG ACCGGTTCGT CCAGCTCACG CCGGCCTACG CCGAGGGCGA CCGGGTGCTG
GCCGACGGCG CGGACATCGC GCTGCCCGAC ACCGGTGTCC CGGTCGAGCT GGACCGGATC
TACGCGAGCC TGCGCGACCT CTCCGAGGCC CTCGGCCCCA ACGGCGTCAA CAAGGACGGC
ACCCTCGACC ATCTGCTCGA GGCCGGGGCG CACGCGTTGG ACGGCAGGGG CGCGCTCGGC
AACCGGATGC TCACCCGGCT CGCCGCGGCC GCGCGGACGT TCGGCGAGGG AGCGGGTCCG
CTGTTCGACA CCGTCAGCCG GCTCGCCGAG TTCACCACCA CGCTCGCGGA GAACGGCAAG
TTCGTCCGGG CGTTCATCAA GGACCTCGCC GGCGTCTCGT CCCAGCTCGC GGACGAGCGA
ACCGAGATCC AGGGAGCGCT CGCGGCGGTC GCGGACGCGG TCGGGACCGT GAAGTCGTTC
GTGCACGACA ACCGTGCGGC GCTGGTCGCG GACGTCGAGC GACTCACCCG GGTGATGAAG
ACCATCGCCT CCGAGAAGGA CAGCATCGAC ACCGCGCTGC GCGTCGCGCC CGTAGCCATC
GGCAACCTCA GCCTGGCCTA CAACAGCAGG TCCGGGACGA TCGGCTCCCG CATCGGCATC
AGCGGCAACG TGTGGGACGC CGACGGCTTC CTGTGCGCCG TGGTCCAGCA GTCCAGCCTC
TCGCGGGCCA GCAAGGACCT GGCGTGCACG CTGTTCAAGC AGCTTCTCGA GCCGGTCGAG
GGCCAGGTGC CGACCATCCC GCCCGGGCCC GACGGCCGGT CGTCGACGGG CGATCAGGTG
CCGCGCCAGG TGCAGCGTCA GTACGCCGGA GCCGGCGGCG GGTCGCTCGG CCAGCTGATG
GGGGGCGGCT CGTGA
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| Protein sequence | MITGLWSRVN GRALAVAAAV VLLAATYFIV LRDDTATKTV SAHFPRAVSI YEGSDVRILG
VNVGRVTAVT PEGNSVRVDM EYDAEYQVPA DAQAVIVTPT LVADRFVQLT PAYAEGDRVL
ADGADIALPD TGVPVELDRI YASLRDLSEA LGPNGVNKDG TLDHLLEAGA HALDGRGALG
NRMLTRLAAA ARTFGEGAGP LFDTVSRLAE FTTTLAENGK FVRAFIKDLA GVSSQLADER
TEIQGALAAV ADAVGTVKSF VHDNRAALVA DVERLTRVMK TIASEKDSID TALRVAPVAI
GNLSLAYNSR SGTIGSRIGI SGNVWDADGF LCAVVQQSSL SRASKDLACT LFKQLLEPVE
GQVPTIPPGP DGRSSTGDQV PRQVQRQYAG AGGGSLGQLM GGGS
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