Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2814 |
Symbol | |
ID | 4596104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2984662 |
End bp | 2985591 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639777419 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_924003 |
Protein GI | 119717038 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.267626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCCCT CTCTCGACGG CCGGGTGGCG ATCGTCACCG GGGCCGGTGC CGGCCTGGGC CGCGCCGAGG CCCTCGCGCT CGCCGACGCC GGTGCCCGCG TCGTGCTCAA CGACCTGCCC GGCGGCGCCG ACGAGGCGGC CGAGGAGATC CGGTCCCGCG GCGGCGAGGC GACGGTCGTC GCCGGCGACG TGGGGGAGCG CGCCAGCGCC GACGCGATGG TCGCCGCGGC CGTCGACGGC TTCGGCGCCC TGGACATCGT CGTGAACAAC GCCGGCGTGA CGCGCGACCG GATGCTGTTC AACATGTCCG ACGAGGAGTG GGACCAGGTG ATCCACATCC ACCTGCGCGG TCACTTCCTG CTGTCCCGCA ACGCCGCGGC GTACTGGCGG GCCAAGGCCA AGGAGACCGG CGCGCCGGTC GGCGCGAGCG TGGTCAACAC CGCGTCCGAG GCGTTCCTCT CCGGGCCGCC CGGACAGGCC AACTACGGCG CTGCGAAGGC CGGGATCGCC GCGCTCACCG TCTCGACCGC GCGGGCGCTG GCCAGCAGCG GCGTGCGCGC GAACGCGATC TGCCCCCGGG CGCGGACCGC GATGACCGCC GACGTGTTCG GCGCGGACGA CTCGGGGCTC GAGGTCGACC CGTACTCGCC CGAGCACGTC GCGCCCGTCG TCGCCTACCT CTCCTCGCCG GCGGCCGCGC ACATCACCGG CCAGGTCTTC GTCGTGTACG GCGGCATGGT CGCGCTGGTC GCCGCCCCGG TGGTCGAGCA GCGCTTCGAC AAGTCCGGCT CGCTGTGGAC CCTGGACGAC CTCGACCGGC AGCTCGGTGG CTACTTCGAG GACCGGGACC CCTCCGTCGG CTTCGCCGCC GACTCGATCA TGCGCCTCTC GCTGGCCGAG CCCGTCGAGG CCCAGGAGGT GCGGGCATGA
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Protein sequence | MTPSLDGRVA IVTGAGAGLG RAEALALADA GARVVLNDLP GGADEAAEEI RSRGGEATVV AGDVGERASA DAMVAAAVDG FGALDIVVNN AGVTRDRMLF NMSDEEWDQV IHIHLRGHFL LSRNAAAYWR AKAKETGAPV GASVVNTASE AFLSGPPGQA NYGAAKAGIA ALTVSTARAL ASSGVRANAI CPRARTAMTA DVFGADDSGL EVDPYSPEHV APVVAYLSSP AAAHITGQVF VVYGGMVALV AAPVVEQRFD KSGSLWTLDD LDRQLGGYFE DRDPSVGFAA DSIMRLSLAE PVEAQEVRA
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