Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2741 |
Symbol | |
ID | 4597309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2914287 |
End bp | 2915168 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777347 |
Product | short chain dehydrogenase |
Protein accession | YP_923931 |
Protein GI | 119716966 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0662614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCAT TGTTGGAAGG TCGGGTCGCG ATCGTGACCG GCGCGGGCCG CGGCATCGGC CGCGCGCACG CACTCGAGCT CGCCCGGCAC GGCGCCGCCG TGGTCGTGAA CGACTACGGC GTCTCGTTGG CGGGTGAGGA GTCCGGTGAG ACCCCGGCCG AGTCGGTCGT CGCCGAGATC GAGGCCGCCG GTGGCCGGGC GGTGGTCAAC ACCGCCGACG TCGCGGACTT CGACCAGGCC GCGGCGATGG TCCAGCAGGC GGTCTCGACG TACGGCGGGC TCGACGTCTT GGTGAACAAC GCCGGGTTCG TGCGCGACCG GATGCTGGTG AACACGGCCG AGGAGGAGTG GGACGCGGTG ATCCGGGTGC ACCTCAAGGG GCACTTCGCG CCGCTGCGCC ACGCCGGCGC CTACTGGCGG GCGGAGGCGA AGGCGGGGCG GCCGCGTGCG GCCCGGGTCA TCAACACCTC GTCCGGAGCC GGCCTCCAGG GCTCGGTCGG CCAGGCGACG TACTCCGCGG CCAAGGCGGG CATCGCCGGG CTCACCCTGG TCGCCGCCCA GGAGCTCGGC AGGTACGGCG TGACCGTCAA CGCGATCGCC CCGGTGGCGC GGACCCGGAT GACCGAGGGC GCGTTCGACA CCTCGGCGAT GGCGATGCCC GAGGACAACT CGCCCATCGT CGCGTGGCTG GCGTCGGCCG ACGCCGGCGA CGTCACCGGG CGGGTGATCG AGATCGACGG CTCGACCATC ACCGTCGAGA CCGGCTGGGC CCACGGCCCC AAGAACGACC TCGGCCGCAG GTGGGAGGCG GCCGAGGTCG GCCCGGCGGT GCGTGCCCTT CTCGCCGCCG CGCCCGCCCC GGAGCCGGTG TACGGGGCGT AG
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Protein sequence | MSSLLEGRVA IVTGAGRGIG RAHALELARH GAAVVVNDYG VSLAGEESGE TPAESVVAEI EAAGGRAVVN TADVADFDQA AAMVQQAVST YGGLDVLVNN AGFVRDRMLV NTAEEEWDAV IRVHLKGHFA PLRHAGAYWR AEAKAGRPRA ARVINTSSGA GLQGSVGQAT YSAAKAGIAG LTLVAAQELG RYGVTVNAIA PVARTRMTEG AFDTSAMAMP EDNSPIVAWL ASADAGDVTG RVIEIDGSTI TVETGWAHGP KNDLGRRWEA AEVGPAVRAL LAAAPAPEPV YGA
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