Gene Noca_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2628 
Symbol 
ID4599907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2796186 
End bp2797379 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID639777234 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_923818 
Protein GI119716853 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase
[TIGR03447] cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTGC ACGACACGCC GTCGGCCCGC AAGGTCACGA CCACCCCGGA CGGGCCCGCT 
CGCCTCTACG TCTGCGGCAT CACGCCGTAC GACGCCACGC ACCTCGGGCA CGCGTCGACG
TACGTTGCCT TCGACCTGCT CAACCGGGCC TGGCGCAACG CCGGCCACGA CGTGACCTAT
GTCCAGAACG TGACCGACGT GGACGACCCG CTCCTCGAGC GCGCCGCGAA GGTGCACGTC
GACTGGGTGG AGCTCGCCGA GCGCGAGACC GAGCTGTTCC GGCAAGACAT GGCGGCGCTC
CGGGTGATCC CACCCGACCA CTACGTCGGT GCGGTCGAGT CCATCCCGCT GGTCATCGAG
CTGATCGGCC GGCTCGAGAC CGCCGGCGCC ATCTACCGCG TCGAGGACGA CCTCTACTTC
TCGGTGACCG CCGACCCCGC CTTCGGCGCC GAGTCCGGCT GGGACCGCGA GCGGATGCTC
GAGATCTACC CCGAGCGCGG CGGGGACCCC GACCGGCCAG GCAAGAAGGA CCCGCTCGAC
TGTGTCGTGT GGCGGGGCCG GCGCGAGGGC GAGCCGTCGT GGGAGAGCCC GTGGGGCCCG
GGACGCCCGG GCTGGCACGT GGAGTGCACG GCCATCGCAC AGCGTCACCT CGGCGGGGCG
TTCGATGTGC AGGGCGGCGG CAGCGACCTG GTGTTCCCGC ACCACGAGAT GTGCGCCGGC
CACGCCCAGG TCGCCGTCCC GGGCACGCCG TTCGCGCAGG TCTACAGCCA CGGCGGCATG
GTCGGCTACG ACGGCGAGAA GATGTCGAAG TCCCGCGGCA ACCTGGTCTT CGTCTCCGCG
TTGCGCAACA GCGACGTCGA CCCGATGGCG ATCCGGCTCG CGCTGCTGCG CCACCACTTC
CGCTCCGACT GGGAGTGGAC CGACGACCAG CTGTGGGTCG CCGTCGACGA CATCGCCCGC
TGGCGCAAGG CCCTCTCGCT CGGCGCCGGC GCACCGGCTG CGCCGGTCAT CGACGAGGTG
CTCGCCGCCC TCGCCGACGA CCTGGACGCG CCGCGGGCGA CTGCCGCGAT CGACCGCTGG
GTCGCCGCCA CCCTCGGCAC CGCCGGCCTC GCCGACACCA CCGACCCGGA CGCCGCGGCC
CGGCTCCTGG CCGCCCTCGA CGCCGCCCTC GGCCTCGCTC TCTGGCTCTC CTGA
 
Protein sequence
MALHDTPSAR KVTTTPDGPA RLYVCGITPY DATHLGHAST YVAFDLLNRA WRNAGHDVTY 
VQNVTDVDDP LLERAAKVHV DWVELAERET ELFRQDMAAL RVIPPDHYVG AVESIPLVIE
LIGRLETAGA IYRVEDDLYF SVTADPAFGA ESGWDRERML EIYPERGGDP DRPGKKDPLD
CVVWRGRREG EPSWESPWGP GRPGWHVECT AIAQRHLGGA FDVQGGGSDL VFPHHEMCAG
HAQVAVPGTP FAQVYSHGGM VGYDGEKMSK SRGNLVFVSA LRNSDVDPMA IRLALLRHHF
RSDWEWTDDQ LWVAVDDIAR WRKALSLGAG APAAPVIDEV LAALADDLDA PRATAAIDRW
VAATLGTAGL ADTTDPDAAA RLLAALDAAL GLALWLS