| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2528 |
|---|
| Symbol | |
|---|
| ID | 4597859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2696914 |
|---|
| End bp | 2697906 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639777134 |
|---|
| Product | protein of unknown function UPF0052 and CofD |
|---|
| Protein accession | YP_923719 |
|---|
| Protein GI | 119716754 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTGA ACCGCGCTCA GGCGGTGGTC GCCTTCGGCG GTGGCCACGG TCTCGCCGCC
TCCCTGCAGG CCCTCCGGAT CCTCGTCGAC GAGCTGGTCG TCGACGACCT GACGGCTGTC
GTCACCGTCG CGGACAACGG CGGCTCCTCG GGGCGGCTCC GCTCGGAGTT CGGCGTGCTG
CCGCCGGGCG ACCTGCGGAT GGCGCTCGCG GCGCTGTGCG GGGCCAACCA GTGGGGAGAC
ACCTGGGCCC GCGTGCTCCA GCATCGCTTC GCCGGGCAGG GCGACATGCG CGGCCACGTC
ATCGGCAACC TGCTGATCGT CGGCCTGTGG GAGCAGCTCG GCGACCCGGT CGCGGCGCTG
GACTGGGTCG GTCGGCTGCT GGGCACCTCG GGGCGGGTGC TGCCGATGGC ACTGACCCCG
CTGGACATCA CCGCCGAGGT CCGCGGGCTC GCCGGGGGCC GTGGGCTGAC CACGGTCCGC
GGGCAGGTGG AGGTCGCCAC CACCGACGGC GTGATCGCCT CGATCGCGCT CGATCCGCCC
GATCCCCGGC CGTGCCCCGA GGCGATCGAC GCGGTGCGCG CGGCCGACTG GCTGGTGCTC
GGCCCGGGCT CGTGGTTCAC CTCCGTGATC CCACACCTGA TGGTGCCGGC GCTGCACGAG
GCGATCGTGA CGAGCCAGGC TCGGGTCGTG GTGACCCTCA ACCTCGACGA GCAGGCGGGG
GAGACCCCCG GGTTCGCCGC TGCCGACCAC CTCGCGGTGC TCGCCGAGCA CGCCCCGGAC
CTGCGGATCG ACACCGTGCT GGCCGACGAG CGGAGCGTGC GTGACGGCCT GGACGACCTG
CTCGAGGTGG TCGACGCGAC CGGGGCCCAG CTGGCCGTCG CCGACGTCGC CTGCGACGAC
GGCACCGCGC GGCACGACCC GGCCAAGCTG GCGTCGTCGT ACGCCCGGAT CCTCGGCGCT
GGGGATATCG ACCGGACCGT CACACGTCGT TGA
|
|---|
| Protein sequence | MTLNRAQAVV AFGGGHGLAA SLQALRILVD ELVVDDLTAV VTVADNGGSS GRLRSEFGVL
PPGDLRMALA ALCGANQWGD TWARVLQHRF AGQGDMRGHV IGNLLIVGLW EQLGDPVAAL
DWVGRLLGTS GRVLPMALTP LDITAEVRGL AGGRGLTTVR GQVEVATTDG VIASIALDPP
DPRPCPEAID AVRAADWLVL GPGSWFTSVI PHLMVPALHE AIVTSQARVV VTLNLDEQAG
ETPGFAAADH LAVLAEHAPD LRIDTVLADE RSVRDGLDDL LEVVDATGAQ LAVADVACDD
GTARHDPAKL ASSYARILGA GDIDRTVTRR
|
|---|
| |