Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2366 |
Symbol | |
ID | 4595981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2521860 |
End bp | 2523098 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639776965 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_923558 |
Protein GI | 119716593 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.587886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGTGA TCCACGTCCG GTGTGCGGGC ATGGACGTGT CGAAGAAGGA CGCCAAGGTC TGCGTCCGAC ATGCGGGAGC AGGTCGGCGC AAGACCGTGG AAACGGTCAC GACCTGGACC TCAATGACCG GCCAGATCCT GGCGCTGCGC GAGCATCTGA TCGCCGAGCA GGTCACGTGT GTGGTGATGG AGGCAACCGG TGACTACTGG AAGCCGTTCT ACTACCTGCT CGAAGACCTG CCCGGTGTCG AGGTGATGCT GGTCAACGCC CGCCATGTCA AGACCCTGCC GGGACGCAAG AGCGACGTCG CCGACGCGAC CTGGCTGGCC CAGCTCGGTG CGCACGGCCT GGTCCGGGCC TCGTTCGTGC CACCCGAACC GATCCGGCAA CTGCGGGACC TGACCCGGGC ACGGACCGCG ATCACCCGCG AACGTGGCCG GGAGGTCCAA CGGCTGGAGA AGCTGCTGGA GGACGCCGGG ATCAAGCTGT CCGCGGTCGC CTCCGACATC ATGGGCGTCT CAGGACGGGC CATGCTCGAA GCGCTGATCG CCGGCGACCG CGATCCCGCC GGGCTTGCCG ACCTGGCCAG GCGTCGACTG CGGTCCAAGA TCCCTGAACT GACCGAAGCG CTCGCTGGCC GGTTCACCGA ACACCACGCG TTCCTCGCCC GGGTCCACCT GGATCTCATC GACCGACACA CCGCCGCCGT CGAGCAGTTG ACTGAGCGGA TCGAGGTGGT GATCGAGCCG TTTCAGGGCT TCCACGACCT GATCTGCACG ATCCCGGGAA TCTCCACGAT CACCGCCGAC ATCATCACCG CCGAGACCGG CGCGGACATG ACCCGGTTCC CCACTGCCAA GCACCTCGCC TCTTGGGCCG GGACCACACC CGGCAGCAAC GAGTCCGCCG GGAAGGTGAA GTCCTCACGG ACCAGGCCCG GGAACCCCTA CCTGCAGGGC GCACTCGGGG CGGCCGCGAT GGCGTGCTCA CAGAACCGGA CCACCTACCT CGGCGCGCGC TACCGGCGGA TCGCCAGCCG GCGCGGCCCG CTGAAGGCCA ACGTCGCGAT CCAGCACTCC ATGCTCATCG CGATCTGGCA CATGGGCACC ACCGGCACCC TCTACGACGA CCCTGGAGGC GAGTTCTTCA ACCGCCTCCA CCCCGACCGC ACCAAGATGC GAGCCATCAG CCAGCTCGAA GCCATGGGCT ACCGCGTCAC CCTCGACCAC GCGAGCTGA
|
Protein sequence | MEVIHVRCAG MDVSKKDAKV CVRHAGAGRR KTVETVTTWT SMTGQILALR EHLIAEQVTC VVMEATGDYW KPFYYLLEDL PGVEVMLVNA RHVKTLPGRK SDVADATWLA QLGAHGLVRA SFVPPEPIRQ LRDLTRARTA ITRERGREVQ RLEKLLEDAG IKLSAVASDI MGVSGRAMLE ALIAGDRDPA GLADLARRRL RSKIPELTEA LAGRFTEHHA FLARVHLDLI DRHTAAVEQL TERIEVVIEP FQGFHDLICT IPGISTITAD IITAETGADM TRFPTAKHLA SWAGTTPGSN ESAGKVKSSR TRPGNPYLQG ALGAAAMACS QNRTTYLGAR YRRIASRRGP LKANVAIQHS MLIAIWHMGT TGTLYDDPGG EFFNRLHPDR TKMRAISQLE AMGYRVTLDH AS
|
| |