| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2313 |
|---|
| Symbol | |
|---|
| ID | 4595928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2462625 |
|---|
| End bp | 2463575 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639776912 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_923505 |
|---|
| Protein GI | 119716540 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0072758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGGGC CTGACAGGCT GGCGGGCATG GAGCTGCGCG TCTTCACCGA ACCCCAGCAG
GGAGCCACCT TCGACGACCT GGTGCGGGTC GCCCAGGAGG CCGAACGGCT CGGCTTCGGG
GCGTTCTTCC GGTCCGACCA CTACCTCGGG ATGGGCACCG AGGGGCTGCC CGGCCCGAGC
GACGCGTGGG TGACCCTGGC CGGCCTGGCC CGGGAGACCA CGACCATCCG GCTCGGCACG
ATGATGACCA GCGCGACGTT CCGGCTGCCC GGGCCGCTGG CGATCGCGGT CGCCAACGTC
GACCAGATGA GCGGCGGGCG GGTCGAGCTC GGCATCGGCG CCGGCTGGTT CGAGGCCGAG
CACACGGCGT ACGGCATCCC GTTCCCCGGC ACCGCCGAGC GGTTCGACCG GTTCGAGGAG
CAGCTCGCGA TCATCACCGG GCTGTGGGCG ACACCGGCGG GGGAGCGGTT CGACTTCGAG
GGGGTGCACT ACCGGCTCGC GGACTCGCTG GCGCTGCCCA AGCCCGTGCA GCCGGCTCCG
CCGGTGCTGG TCGGCGGTCT CGGCAAGCGC CGTACCCCGG AGCTCGCGGC CCGCTACGCC
GACGAGTTCA ACCTGCCGTT CGTCGACGAG GCGACCACGG CGGCGCAGTT CGCGCGGGTG
CGCGAGGCGT GCGCCGAGCA GGGCCGCGAC CCGGGCACGC TGACCTGGTC CAACGCGCTG
GTGCTGTGCG TCGGTGCCGA CGAGGCCGAG CTCGGCCGTC GCGCGGCCGC GATCGGTCGC
GAGCCCGCGG AGCTGCGCGT CAACGGGCTC GCGGGGACGC CCGCCGAGGT GGTCGACAAG
ATCGGGCGGT ACGCCGAGCT CGGCGCCGAG CGGGTCTACC TGCAGGTCCT GGACCTGGCC
GACCTCGACC ACCTGCGGCT GGTGGCCGCG GAGGTCCTGC CGCACGTCTG A
|
|---|
| Protein sequence | MSGPDRLAGM ELRVFTEPQQ GATFDDLVRV AQEAERLGFG AFFRSDHYLG MGTEGLPGPS
DAWVTLAGLA RETTTIRLGT MMTSATFRLP GPLAIAVANV DQMSGGRVEL GIGAGWFEAE
HTAYGIPFPG TAERFDRFEE QLAIITGLWA TPAGERFDFE GVHYRLADSL ALPKPVQPAP
PVLVGGLGKR RTPELAARYA DEFNLPFVDE ATTAAQFARV REACAEQGRD PGTLTWSNAL
VLCVGADEAE LGRRAAAIGR EPAELRVNGL AGTPAEVVDK IGRYAELGAE RVYLQVLDLA
DLDHLRLVAA EVLPHV
|
|---|
| |