| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2211 |
|---|
| Symbol | |
|---|
| ID | 4598709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2359488 |
|---|
| End bp | 2360426 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639776812 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_923405 |
|---|
| Protein GI | 119716440 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTA CAACCACGGC TGAAGCCATC ACGGTGGCCG GCCTGCGCAA GAGCTTCGGC
CCGACCCGGG CTCTGGATGG CCTGGACCTG GCCGTCGGCG CGGGTGAGGT GCACGGCTTC
CTCGGCCTCA ACGGGGCCGG GAAGACCACC ACGATCCGGA TCCTGCTCGG CCTGATGCGC
GCCGACGCAG GCACGACGCG ACTGCTCGGG GGCGACCCCT GGGGGGACGC CACCCGGCTG
CACCGCCGGA TCGCCTACGT GCCCGGCGAT GTCGCGTTGT GGCCCGGCCT GACCGGCGGT
GAGGTGATCG ACCTGCTCGG CCGGATGCGC GGCGGCCTGG ACGGGAAACG CCGCGACGAA
CTGCTCGAGC GGTTCGACCT CGACCCCCGC AAGAGGGGCC GCGCCTACTC CAAGGGCAAC
CGGCAGAAGG TCCCCTTGGT CGCCGCGCTG GCCTCCGACG CCGAACTGCT GCTCCTCGAC
GAGCCCACCT CCGGACTGGA CCCGTTGATG GAGGAGACCT TCCGTCAGGT CATCGCAGAG
GACCGTCACC GGCTCGGCCG GACGGTGCTG CTGTCGAGCC ACATTCTGGC CGAGGTCGAG
GTGCTGTGTG ACCGGGTCAC CATCATCCGT GACGGCCGGG CCGTGGAATC CGGCACTCTC
ACCGAGCTTC GCCATCTGAC CCGCACCTCG GTCACCGCCG AAGTGACCGG CCCGGCGCAG
GACTTGGGCA CCCTCGCCGG TGTCCACGAC CTGCACATCG ACGGCACCCG GGTCCGGTTC
GGGGTCGACG GCGCCGGGCT CCCGGACGTG TTGAGCTTCC TCGGATCCGC GGGGGTCCGC
TACATCGTGT GCCGGCCGCC CAGCCTGGAG GAGCTGTTCC TGCGCCACTA CGAAACCCAG
CCCGCCACCA CAGCGTCCGG GCCCGGCGGC ACCAGATGA
|
|---|
| Protein sequence | MTSTTTAEAI TVAGLRKSFG PTRALDGLDL AVGAGEVHGF LGLNGAGKTT TIRILLGLMR
ADAGTTRLLG GDPWGDATRL HRRIAYVPGD VALWPGLTGG EVIDLLGRMR GGLDGKRRDE
LLERFDLDPR KRGRAYSKGN RQKVPLVAAL ASDAELLLLD EPTSGLDPLM EETFRQVIAE
DRHRLGRTVL LSSHILAEVE VLCDRVTIIR DGRAVESGTL TELRHLTRTS VTAEVTGPAQ
DLGTLAGVHD LHIDGTRVRF GVDGAGLPDV LSFLGSAGVR YIVCRPPSLE ELFLRHYETQ
PATTASGPGG TR
|
|---|
| |