| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2200 |
|---|
| Symbol | |
|---|
| ID | 4599107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2349101 |
|---|
| End bp | 2350084 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639776801 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_923394 |
|---|
| Protein GI | 119716429 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCG ACGAGCAGAC ATTCGCCCAG CTCTCCAACG GCCTGGTGTA CTCCGCCATC
GCCGTCTACG CCCTGGCCAT GCTGGCCTAC GCCGCCGAAA CCGCCGGACG CATGGCAGGC
GCCCAGATGG ACGGCGCCGG GGTGGCAAGC GCACGCCTGG AAGGCGCTCG TGCGGCAGGC
ACCCAGGAGG CAGACACCGG CACGTTGGTC GCCGACCCGC CATCCCGCAG CCGCCTGCTG
GGCGCGTTCG GCACGTCGCT GACCGTGCTG GCGTTCCTGC TGAATCTCGG CGGCGTGGTC
ACCCGGGGTC TCGCGGCCGG CCGGGTGCCG TGGGGCAACA TGTACGAGTT CGTGCTCGTG
TGCGCCCTCG CAGCCGGCGC GGCGTACCTG GCGTTCCTGT CCAGGCGCCC GGTCCGGGCC
TTCGGCGTCT GGATCGTGGC CATCGTCCTA CTCGCCCTCG GCCTGGCCGT CACCGTCCTC
TACGCCCCCG CCGGCGAGCT GGTGCCGGTC CTGGACTCCT ACTGGCTGCT GATCCACGTC
GCCGCCGCCA TCACCGGCGG CGGCGTCTTC ACCGTCGGCG CCGTCGCGAC CACCCTGTTC
CTGGTCCGCC ATCGCCAAGA GCGCCGCGGC ACCGCGCAGA CCCCCAGGGG ACGCTACGCC
GCCAGCCTCC CCACCACGCG CACCCTGGAG CAGGTCGCCC ACACCGCCCA CATCTTCGCC
TTCCCGATCT GGACCTTCGC CGTGATGGCC GGCGCCATCT GGGCCGAAAA CGCCTGGGGC
CGCTACTGGG GCTGGGATCC CAAGGAGACC TGGGCGTTCA TCACCTGGGT CTTATACGCC
GCACACCTGC ACGCCCAGGC AACCGCCGGG TGGCGCGGCG TCCGCGCCTC CTGGTTCGCC
CTCGCGGGCT ACGCCGCGTT CCTGTTCAAC TTCTTCGGCG TCAACCTGTG GATCTCTGGA
CTCCACTCCT ACGCCGGCGT CTGA
|
|---|
| Protein sequence | MILDEQTFAQ LSNGLVYSAI AVYALAMLAY AAETAGRMAG AQMDGAGVAS ARLEGARAAG
TQEADTGTLV ADPPSRSRLL GAFGTSLTVL AFLLNLGGVV TRGLAAGRVP WGNMYEFVLV
CALAAGAAYL AFLSRRPVRA FGVWIVAIVL LALGLAVTVL YAPAGELVPV LDSYWLLIHV
AAAITGGGVF TVGAVATTLF LVRHRQERRG TAQTPRGRYA ASLPTTRTLE QVAHTAHIFA
FPIWTFAVMA GAIWAENAWG RYWGWDPKET WAFITWVLYA AHLHAQATAG WRGVRASWFA
LAGYAAFLFN FFGVNLWISG LHSYAGV
|
|---|
| |