| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2105 |
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| Symbol | aceE |
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| ID | 4599949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2248629 |
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| End bp | 2251307 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639776708 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_923301 |
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| Protein GI | 119716336 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00865423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACTG CGAACCTCCC CCACGACCCG ATCGACTGGC ACGACGAGCG CGCGGAGTGG
CTCGACTCGG TCAGCGGCCT GGTCCGCACC CACGGACCGC ACGCCGCGAG CCTGCTCCTC
CGCGACGTGG CCACCCACGC CGGCCGGCTC GGGGTCGCGA CCGGGCCGCG TACGCCGTAC
CTCAACACGA TCCCGACCCA GGAGTGGGCC GCCTATCCCG GCGACCTCGC CCTCGAGGAG
CGGATCGACG CCTACCTGCG GTGGAACGCG ATGGCGATGG TGGTCCGGGC CAACAAGCGC
CACGCCGGCC TCGGCGGGCA CCTGTCGACC TACGCGTCCA CGCTGACCCT GTGGGAGGTC
GGCTTCCAGC ACTTCTTCCG CGGCCGCGGC TCGGCGGGCG AGGCCGTCGT CCCCGGAGAC
CAGGTGTTCT TCCAGGGCCA CGCCAGCCCG GGCATCTACG CCCGGGCCTT CCTCGAGGGC
CGGCTGAGCG CCGAGCAGCT CGACCACTTC CGGCGCGAGG TAGCCGGCGC GGGGCAGGGC
CTCCCGTCGT ACCCGCACCC CCGGAGCATG GCCGGCTTCT GGGAGTTCCC GACCGTGAGC
CTCGGCATCG GCCCGCTGCA CGCCGTCTAC CAGGCCCGAT TCAACCGCTA CCTCGCCGCG
CGCGGCCTCG CCGACACGGC GGCCGCCCGG GTGTGGTGCT TCGTCGGCGA CGGCGAGATC
GACGAGCCCG AGACGCTGGC CGCGATCCGG CTGGCCGCCC GCGAGCACCT GGACAACATC
GTCTTCGTCG TCAACGGCAA CCTCCAGCGC CTCGACGGGC CGGTCCGCGG CAACAGTCGC
GTCCTCGACG AGCTCGAGGG CATCTTCGCC GGCGCGGGTT GGCACGTCCT CAAGGTGCTG
TGGGGCAGCC GGTGGACCTC GCTCTTCGAG CGCCCCGGCG GCGAGGCCCT GCTCGACCGG
CTCGAGGCGA TGAACGACGG GGACCTGCAG CGGCTGGCGA TCCTCGAGCC CGCCGAGCTG
CGCGCGACCC TGTTCGGCGG CGGCGACGCC GCGCTGGAGG CGCTCGGCGC GACGCTCTCC
GATGCCGACC TCGCCGGGCT GCGGCGCGGC GGGCACGACC CGCGAGCCGT CTACGCTGCG
TACGCCGAGG CCGTCGCGCA CCGGGGCGAG CCCACCGTGG TGCTGGCGCA GACGATCAAG
GGCTACGCGC TCGGCCCGAA CTTCGAGGGC CGCAACGCCA CTCACCAGAT GAAGAAGATG
ACGCCGGACC AGCTGCGCAT CTTCCGCGAC ATCCTCCGGG TGCCGGTGAC CGACGAGGAG
CTGGCCGACG GGCTGCCGCC GTACCTGCCG CTGCCCGAGG GCTCGCCGGA GCTGGAGTAC
CTCCACGCCC ACCGGCGCAC GCTCGGCGGC GCGCTCCCCC GCCGGCCGCT GCGCCCCGCC
GTCCTGGCCG CCCAGCCGGC CGACGCGCCC TTCACCCAGT TCGACGCCGG GTCCGGCAAG
CGCACCGTGT CGACCACGGT CGCCTACACC CGGCTGCTGC ACTCGCTGAT GCGCGACCCC
GAGGTCGGGC GGCGAATCGT GCCGATCGTC CCGGACGAGG GCCGCACCTT CGGCTACGAG
CCGCTGTACA GCGAGTTCGG CATCTACGCG CCCGACGGGC AGCAGTACAC GCCGGTCGAC
GCCGGCCTGC CGCTGTCCTA CCGGGAGAGT GCGGACGGGC AGGTGCTGCA GGAGGGGATC
ACCGAGGCCG GCGGGCTCGC CGAGCTGACG GCGGCGGCCA CGGCCGGGCA CACCTGGGAC
ACCGCGGTCG TCCCGTTCTT CACCTACTAC TCGATGTTCG GCTTCCAGCG CGTCGGCGAC
CTGATCTGGG CCCTCGCCGA CGCCCGGGGC CGCGGGTTCC TGGTCGGCGC GACGGCCGGT
CGTACGACGC TCGCCGGCGA GGGCCTGCAG CACACCGACG GCTCCTCGCA GCTGGCCGCG
CTCGCCGTCC CGAGCTGCCA CGCCTACGAC CCGGCCTTCG CCTACGAGAC CGCCACCATC
GTCCGCGACG GGATCCGGCG GATGTACGAC GCCGGCGAGG AGTCCTTCTA CTACCTGACC
GTCTACAACG AGGACTACGT CCAGCCGGTC AAGCCGGTCG ACTCCGGTGT CCGCAGCGTC
AGCGTGGACG AGGCGATCGT CGCCGGCCTG TACCGGGTCG ACGCGACCGA GGGCAATCGG
CTCCCCCAGG TCCGCCTCCT GGCCTCCGGG CCGGCCGTCC GCACCGCGCA GCAGGCGGCC
GCGGACCTGG CCGCGCGTGA CGGCGTCACC GCCGAGGTGT GGTCGGTGAC CAGCTGGAAG
GCGCTGCGCG ACGACGCGCT CGAGACCGAG CGCTGGAACC GCGAGCACCC CCACGAGCCG
GCCCGCGTCA GCTACCTGCG CCGTGCCCTC GGCGACCTGC CGGTGCCGGT GGTCGCCGTG
AGCGACTACG TGTCCGCGTT GCCGGACCAG ATCGCGCGCT TCGTCGACGC CCCCTTCGTG
AGCCTCGGCA CCGACGGCTA CGGCCTCTCC GACACGCGCG AGGAGCTCCG CGCCCACTTC
GGTGTCGACG CGGAGGGGAT CCGCGCGACG GCTGCCGGGG TCGCCGACCG GCCGGCGACC
CACCGCGCGG CCCGCCCCGA CGAGGGCCTG GTGGCCTGA
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| Protein sequence | MTTANLPHDP IDWHDERAEW LDSVSGLVRT HGPHAASLLL RDVATHAGRL GVATGPRTPY
LNTIPTQEWA AYPGDLALEE RIDAYLRWNA MAMVVRANKR HAGLGGHLST YASTLTLWEV
GFQHFFRGRG SAGEAVVPGD QVFFQGHASP GIYARAFLEG RLSAEQLDHF RREVAGAGQG
LPSYPHPRSM AGFWEFPTVS LGIGPLHAVY QARFNRYLAA RGLADTAAAR VWCFVGDGEI
DEPETLAAIR LAAREHLDNI VFVVNGNLQR LDGPVRGNSR VLDELEGIFA GAGWHVLKVL
WGSRWTSLFE RPGGEALLDR LEAMNDGDLQ RLAILEPAEL RATLFGGGDA ALEALGATLS
DADLAGLRRG GHDPRAVYAA YAEAVAHRGE PTVVLAQTIK GYALGPNFEG RNATHQMKKM
TPDQLRIFRD ILRVPVTDEE LADGLPPYLP LPEGSPELEY LHAHRRTLGG ALPRRPLRPA
VLAAQPADAP FTQFDAGSGK RTVSTTVAYT RLLHSLMRDP EVGRRIVPIV PDEGRTFGYE
PLYSEFGIYA PDGQQYTPVD AGLPLSYRES ADGQVLQEGI TEAGGLAELT AAATAGHTWD
TAVVPFFTYY SMFGFQRVGD LIWALADARG RGFLVGATAG RTTLAGEGLQ HTDGSSQLAA
LAVPSCHAYD PAFAYETATI VRDGIRRMYD AGEESFYYLT VYNEDYVQPV KPVDSGVRSV
SVDEAIVAGL YRVDATEGNR LPQVRLLASG PAVRTAQQAA ADLAARDGVT AEVWSVTSWK
ALRDDALETE RWNREHPHEP ARVSYLRRAL GDLPVPVVAV SDYVSALPDQ IARFVDAPFV
SLGTDGYGLS DTREELRAHF GVDAEGIRAT AAGVADRPAT HRAARPDEGL VA
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