Gene Noca_2060 details

Gene Information

• Locus tag: Noca_2060
• ID: 4595814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2203734
• End bp: 2204453
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639776663
• Product: hypothetical protein
• Protein accession: YP_923256
• Protein GI: 119716291
• COG category: [S] Function unknown
• COG ID: [COG0586] Uncharacterized membrane-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00249342
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGCA TCGTCGAGCA CCTGCTCGCG CTGCCGGTCT GGCTCGGACT GCTGGTGGTC 
TTCGCGCTGC CGGCCCTGGA GTCCTCCGCG TTCGTCGGGT TCGTCTTCCC CGGCGAGATC 
GCGGTGCTGC TCGGCGGCGT GGCCGCCGGC CAGGGGCACC TGCCGCTCGC GGCGGTGCTC 
GGCGCGGCGA TCGGCGGGGC GGCCGTGGGC GATGCCGTCG GCTACCTGGT CGGGCAGCGG 
TGGGGACGCC GGATCCTCGA CTCGACGGTG GGTCGCCTGG TCCGGGCCGA GCACCTCGAC 
CGCGCTGCGG ATCTGCTCGC GCGCCGCGGC GGGCCGGCGG TCTTCATCGG CCGGTTCACG 
GTCGCCCTGC GGGTCCTGGT CCCGGGCCTG GCCGGGATGG CCCGGATGCC CTATCGGACG 
TTCGCCCTGT TCAACATCGC GGGCGCCGCG GCCTGGGCGA GCGCCGTCGC CCTCGCCGGG 
TACCTGGCGG GCAACAACTG GCACGTCGTC GAGCACGTCA TCTCGGGCGT CGGGATCGGC 
CTGGCGGTCC TCATCGTCGC GGGCCTGCTC GGCGTGCACC TCGCGCGCCG GCGCGGGCTC 
GGCCGCCACC GGGTCCGCCT TCATCGGCCC TTCATCCGCC GCGGCCTACG GTCGCCGCGT 
GTCCAGCCCC GGGTCCGTCA CCGCACCCCC GGTCGCCGAG CGAGGTCCTC GACCGGGTGA 

 

Protein sequence

MTGIVEHLLA LPVWLGLLVV FALPALESSA FVGFVFPGEI AVLLGGVAAG QGHLPLAAVL 
GAAIGGAAVG DAVGYLVGQR WGRRILDSTV GRLVRAEHLD RAADLLARRG GPAVFIGRFT 
VALRVLVPGL AGMARMPYRT FALFNIAGAA AWASAVALAG YLAGNNWHVV EHVISGVGIG 
LAVLIVAGLL GVHLARRRGL GRHRVRLHRP FIRRGLRSPR VQPRVRHRTP GRRARSSTG