Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2040 |
Symbol | |
ID | 4598663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2183254 |
End bp | 2184510 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639776643 |
Product | hypothetical protein |
Protein accession | YP_923236 |
Protein GI | 119716271 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.923068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACACCC AGACCCTGAT CAACCTCGCC CTGGTCCTGT TGTTCATCCT GGTCGGCGGG GTGTTCGCCG GCACCGAGAT CGCGCTGGTC TCGCTGCGCG AGGGCCAGAT CAACACGCTC GCCTCGCGCG GCGCGCGCGG CGCCAGGGTG GCCTCCGTGG CCCGCGACCC GAACCGGTTC CTCGCCGCGG TCCAGATCGG CGTCACGCTG GCCGGCTTCT TCTCCGCGGC GTACGGCGCC TCCACCCTCG CGCCCGACTT CGCGCCGGTG CTCGAGCACG CCGGGCTCGG CGCGGACGCG GCCGACACCG CCGCGCTGGT GCTGCTGACA CTGTTCATCG CCTACCTCTC CCTGGTGTTC AGCGAGCTGG TCCCCAAGCG GCTCGCCCTC CAGCGCGCGG CCGGCGTGTC CTACCTCGTC GGCGCGCCGC TGGACCGGTT CGCGACCCTC ATGCGCCCGG TGGTGTGGCT GCTCTCGGTC TCCACCAACG CGGTGGTCCG CCTCTTCGGC GGCGACCCCG GCGCGGCCGC CGAGGATCTC AGCGACGAGG AGCTGCGCTA CCTGGTCGAC CAGCACGAGG GCCTCGCCGA GGACGAGCGG CGGATCCTCG CCGACGTCTT CGACGCCGGC GACCGGTCCC TGAGCGAGGT GATGCGGCCC CGCGGCGACG TGACGTTCCT GGCCGGCGAC GCCACGGTCG CCGACGCGAT CGCCATCGCG CTGACCAGCC CGTACTCCCG CTACCCCGTC ACCGGCACCG GCCACGACGA CATCCGCGGC TTCCTGCACG TGCGCGACCT GCTGGGCGCC GACCCCCGCA AGCGGGTGCG CTCGATCACC CGCAAGATCC TGCACCTGCC CGCCACCAAC CGGGTGCTCC CCTCGCTCTC CCGGATGCGG GCCGAGGGCA GCCACATCGC CGTCGTCGTC GACGAGTACG GCGGCACCGA CGGCATCGTC ACCCTCGAGG ACCTGGTCGA GGAGCTGGTC GGCGACATCC ACGACGAGTA CGACGAGCGG GCGAGCGTGG CGGCCGGCGA GGTGGACGCG GGGCTGACCA TCGAGGAGTT CGGCGAGCGC ACCGGCGTCG AGCTCGAGGA CGGCCCCTAC GAGACCGCCG CCGGGTACGT CGTGCACCGG CTCGGCCGGC TCGCCGTGGC CGGGGACGTG GTGGCCGTGG GCGAGCACGA GATCGAGGTC GCGACCGTCG ACAAGCACCG GATCACCCGG CTGCGGGTGC GCCCGCGCGA GTCCTGA
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Protein sequence | MDTQTLINLA LVLLFILVGG VFAGTEIALV SLREGQINTL ASRGARGARV ASVARDPNRF LAAVQIGVTL AGFFSAAYGA STLAPDFAPV LEHAGLGADA ADTAALVLLT LFIAYLSLVF SELVPKRLAL QRAAGVSYLV GAPLDRFATL MRPVVWLLSV STNAVVRLFG GDPGAAAEDL SDEELRYLVD QHEGLAEDER RILADVFDAG DRSLSEVMRP RGDVTFLAGD ATVADAIAIA LTSPYSRYPV TGTGHDDIRG FLHVRDLLGA DPRKRVRSIT RKILHLPATN RVLPSLSRMR AEGSHIAVVV DEYGGTDGIV TLEDLVEELV GDIHDEYDER ASVAAGEVDA GLTIEEFGER TGVELEDGPY ETAAGYVVHR LGRLAVAGDV VAVGEHEIEV ATVDKHRITR LRVRPRES
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