Gene Noca_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2007 
Symbol 
ID4598629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2148713 
End bp2150239 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content73% 
IMG OID639776611 
ProductATPase domain-containing protein 
Protein accessionYP_923204 
Protein GI119716239 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.639881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAG CGGCAGCGGC AGCGACGACA GCGGCCACGG GAGCAGCGAC GACTGACCCG 
ACGACGGAGG GGACGGACCC CCGACGCAGC GCCCGGCCGA CGTCCCGGCC GGGCGTCTCC
GTCCGGGTCC GCATCACCGC CGCGGTCGCG CTCCTCGGCG CCCTGGCGCT GACCGGCGCG
GGCGCGATCG TCTACGCCGT CGAGGGGCAG CGGGTCGAGG AGCAACAGCT CGCCGAGATC
GACCAGGAGC TCGCGGAGCT GGGCAAGCTG CACAAGCGGG GGCTGAACCC CGACACCGGC
CGGCCGTTCG ACAGCGTCGG CACCATGCTG GACACCTTCC TGGTCCGCAA CGTCCCGGAC
GAGAACGAGA TCCTCGTCAG CTGGTTCGAC GGCCGCCCCC AGAAGGCCTC CCCCACGGCC
GCGTTCGCGG AGACCCAGCT GTTCCGCGAC ACCGCCGGCG CGCTGGTCGA CGACGGCGGC
GGCTCCGCAC GGGTGGACGT GCCCGGGTAC GGCGAGGCGC TGATCACCGT GCAGCCGGTG
CGCAGCACGC GGGAGGCCGG GGCCCTGGTG ATCGTGACCT ACCTGACCGA GGCCCGCGCC
GAGCTGCGCG ACACGATGCG CACCTACGCG ACCGTCGCGC TGCTCTCGCT GTTGCTCGTC
ACCGCAGCCG CGGCCTGGCT GTCCGGTCGG TTGCTCGCGC CGCTGCGCAC GCTCCGCGAG
ACCGCGGACG ACATCTCCGG GTCCGACCTC TCCCGCCGGC TGCCCGTCAC CGGGCACGAC
GACATCACGG CCCTCACCCG TACCGTGAAC GGGATGCTCG ACCGGCTCGA GGCCGCGTTC
GTCGGCCAGC GGGAGTTCCT CGACGACGCC GGGCACGAGC TGCGGACCCC GCTGACCGTG
CTCCGGGGGC ACCTCGAGCT GCTCGACACC GGCGACCCCG CCGAGGTCGC CGAGACCAAG
GAGCTGCTGC TCGACGAGGT GGACCGGATG TCCCGGTTGG TCGGCGACCT GATCCTGCTG
GCGAAGAGCG ACCGGCCCGA CTTCCTCCAG CTCCGGCCGG TCGACCTGGC CGGCCTGACC
GCCGACGTGC TCGCCAAGGC CCGTGGTCTC GGCGACCGGG ACTGGCAGCT CGACGCGGCC
GCCGACGTGG TGGTCGTCGG GGACGAGCAG CGGCTGACCC AGGCCCTGCT CCAGCTCGCC
GACAACGCGG TCAAGCACAC CGGCCCCGGA GACACGGTCG CGATCGGGTC GTCGTACGAC
GACGGCCGCG CGCGGCTGTG GGTCCGCGAC ACCGGACCCG GCGTACCGCC CGAACAGCGC
GGGCTGATCT TTGAACGATT CGGCCGCGGC GCCGTAATGC CTGGTGACGA GGGCTTCGGC
CTCGGCCTGT CGATCGTGTC CGCCATCGCG CGGTCGCACG GCGGCGGCGT CGAGGTCGAG
GACGCCGAGG AGACCGCCCC CCGCGGTGCT CGGTTCGTCA TGACGCTGCC CGCGCCACCG
AAGGAGGACC CGTGGCCAGG ATCCTGA
 
Protein sequence
MTTAAAAATT AATGAATTDP TTEGTDPRRS ARPTSRPGVS VRVRITAAVA LLGALALTGA 
GAIVYAVEGQ RVEEQQLAEI DQELAELGKL HKRGLNPDTG RPFDSVGTML DTFLVRNVPD
ENEILVSWFD GRPQKASPTA AFAETQLFRD TAGALVDDGG GSARVDVPGY GEALITVQPV
RSTREAGALV IVTYLTEARA ELRDTMRTYA TVALLSLLLV TAAAAWLSGR LLAPLRTLRE
TADDISGSDL SRRLPVTGHD DITALTRTVN GMLDRLEAAF VGQREFLDDA GHELRTPLTV
LRGHLELLDT GDPAEVAETK ELLLDEVDRM SRLVGDLILL AKSDRPDFLQ LRPVDLAGLT
ADVLAKARGL GDRDWQLDAA ADVVVVGDEQ RLTQALLQLA DNAVKHTGPG DTVAIGSSYD
DGRARLWVRD TGPGVPPEQR GLIFERFGRG AVMPGDEGFG LGLSIVSAIA RSHGGGVEVE
DAEETAPRGA RFVMTLPAPP KEDPWPGS