Gene Noca_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1951 
Symbol 
ID4599857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2082948 
End bp2083661 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content75% 
IMG OID639776550 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_923148 
Protein GI119716183 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAG AGATCGCGCT CGTGTTCGCC GCCGGCGTGA TCTCCTTCGC CTCGCCCTGC 
GTGCTCCCCC TCGTGCCGGT CTACCTGTCG GTGGCGACCG GCCTGGGGGT GGCCGACCTC
CAGCAGCGGC GCAGCCTGGG CCGGGTGCTG GCCGGCACCT CGGCCTTCGC CGCGGGGTTC
GGCATCGTGT TCGTGCTGCT CGGGCTCTCC GCCACCGCGC TGGGCGGCGC CCTGACCCGC
GAACAGGTCT CGATCACCCG GATCGGCGGC GCGATCGTGC TGACGCTGGC GCTGGTGATG
TTCGCCGGCA CCCTCGACCT GCCGTTCGCG CGAGGGCGGG AGCTCCGCTT CCACCCACGA
CCCGGCGCCG GCGCCACCTG GGCCGCCCCG GTCATGGGAG CGGCGTTCGC GTTCGGCTGG
ACTCCCTGCA TCGGGCCGGT GCTGGGCTCG GTGCTCACCG TCGCCGCCGG CCAGGACGGG
GCGGCCCGCG GCGGCCTGCT GCTGGCCTGC TACGCCGCCG GGCTGACCCT CCCCCTCCTC
GTCACCGCGG TGTTCCTCGG CCGGCTGGGA CCGACGCTGC GCTGGGTGCG CGCCCGAGGG
CTGCTGCTCT CCCGGGCCTC GGCCGTGGTG CTGTTCGGCT ACGGGCTGAT GCTGGTCACC
GACCAGCTCT CGTGGCTGAC CCGGGTGCTG CAGGGGGGTG TGCCCGCCCT CTAG
 
Protein sequence
MTAEIALVFA AGVISFASPC VLPLVPVYLS VATGLGVADL QQRRSLGRVL AGTSAFAAGF 
GIVFVLLGLS ATALGGALTR EQVSITRIGG AIVLTLALVM FAGTLDLPFA RGRELRFHPR
PGAGATWAAP VMGAAFAFGW TPCIGPVLGS VLTVAAGQDG AARGGLLLAC YAAGLTLPLL
VTAVFLGRLG PTLRWVRARG LLLSRASAVV LFGYGLMLVT DQLSWLTRVL QGGVPAL