Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1940 |
Symbol | |
ID | 4599845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2070120 |
End bp | 2071535 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639776538 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_923137 |
Protein GI | 119716172 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0293007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAAGC CCCCGCCGTC CACCGTCGAC CACGTCGTCT CCCTCGCCAA GCGGCGGGGC TTCGTCTACC CGTGCGGCGA GATCTACGGC GGCACCCGCT CCGCCTGGGA CTACGGCCCG CTGGGCGTGG AGCTCAAGGA GAACATCAAG CGCCAGTGGT GGAAGTCCAT GGTCACCATG CGCGACGACA TGGTCGGCCT CGACTCCAGC ATCATCCTGC CGCGGCAGGT GTGGGAGGCC AGCGGCCACG TCGACACGTT CATGGACCCG CTCACCGAGT GCCAGTCGTG CCACAAGCGG TTCCGCGCCG ACCACCTCCA GGAGGAGGTC GCGGAGAAGA AGTCCAAGTC CGAAGGGCAC AGCGTCAACC CCGACGACGT CGATCTCGCG ACGGTGGCCT GCCCCAACTG CGGCACCCGC GGCGCGTGGA CCGAGCCGCG GCAGTTCTCC GGCCTGCTCA AGACCCACCT GGGCGTCATC GAGAACGAGG AGGGCCTGCA CTACCTGCGG CCCGAGACCG CCCAGGGCAT CTTCATCAAC TTCGCGAACG TCGTGACCTC GAGCCGGCAC AAGCCGCCGT TCGGCATCGC CCAGATCGGC AAGAGCTTCC GCAACGAGAT CACCCCCGGC AACTTCATCT TCCGGACCCG CGAGTTCGAG CAGATGGAGA TGGAGTTCTT CGTCAAGCCC GGCGAGGACA AGGAGTGGCA CCAGTACTGG ATCGACGAGC GCACCCGCTG GTACGTCGAC CTCGGCATCG ACCCCGACAA CCTGCGCCAC TTCGAGCACC CGCAGGAGAA GCTCAGCCAC TACTCCACGC GGACCGTCGA CATCGAGTAC CGGTTCCGGT TCGCCGGCTC GGAGTGGGGA GAGCTCGAGG GCATCGCCAA CCGCACCGAC TTCGACCTGA GCACCCACTC CAAGCACTCC GGCCAGGACC TCTCCTACTT CGACCAGGCC AACAACGAGC GCTACGTCCC CTACGTCATC GAGCCGGCCG CCGGCCTGTC CCGCAGCCTG ATGACCTTCC TCGTCGACGC CTACCAGGAG GACGAGGCGC CGAACACCAA GGGCGGCGTC GACAAGCGCA CCGTGCTGCG CCTGGACCCG CGGCTCGCGC CGGTCAAGGT GGCGGTGCTG CCGCTCTCTC GCAACGCGGA CCTCTCGCCG AAGGCCAAGG ACCTCGCCAT GGAGCTGCGC CGGGCCGGGT GGCACGTCGA CTTCGACGAC TCCGGCGCGA TCGGCCGCCG CTACCGCCGC CAGGACGAGA TCGGTACGCC GTACTGCGTG ACCGTCGACT TCGAGACGCT CGACGACCAG GCGGTCACCG TCCGCGAGCG CGACAGCATG CAGCAGGAGC GGATCGGCCT GGACCGGATC AGCGCGTACT TCGCCGAGCG TCTGATCGGC TGCTGA
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Protein sequence | MAKPPPSTVD HVVSLAKRRG FVYPCGEIYG GTRSAWDYGP LGVELKENIK RQWWKSMVTM RDDMVGLDSS IILPRQVWEA SGHVDTFMDP LTECQSCHKR FRADHLQEEV AEKKSKSEGH SVNPDDVDLA TVACPNCGTR GAWTEPRQFS GLLKTHLGVI ENEEGLHYLR PETAQGIFIN FANVVTSSRH KPPFGIAQIG KSFRNEITPG NFIFRTREFE QMEMEFFVKP GEDKEWHQYW IDERTRWYVD LGIDPDNLRH FEHPQEKLSH YSTRTVDIEY RFRFAGSEWG ELEGIANRTD FDLSTHSKHS GQDLSYFDQA NNERYVPYVI EPAAGLSRSL MTFLVDAYQE DEAPNTKGGV DKRTVLRLDP RLAPVKVAVL PLSRNADLSP KAKDLAMELR RAGWHVDFDD SGAIGRRYRR QDEIGTPYCV TVDFETLDDQ AVTVRERDSM QQERIGLDRI SAYFAERLIG C
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