Gene Noca_1897 details

Gene Information

• Locus tag: Noca_1897
• Symbol: dnaE2
• ID: 4596398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2025002
• End bp: 2028439
• Gene Length: 3438 bp
• Protein Length: 1145 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639776495
• Product: error-prone DNA polymerase
• Protein accession: YP_923094
• Protein GI: 119716129
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.211762
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCTGGT CCAACCCCCC GATCTCCTGG GGTGAGCTGG AGAAGCGGCT CTCCGGGCGG 
CTCAGCACGC CCCAGGACCC CGAGGCGCCG ATCTCGACCC GCAAGCGCAA GCGCACCCGG 
GTCGATGTGG CACGGCCGGC CGGCCCGGTC ACGCCGTACG CCGAGCTGCA CTGCCACTCC 
AGCTTCAGCT TCCTCGACGG CGCCAGCGGC CCCGACCACC TGGTGCTCGA GGCGCTCCGG 
CTCGGCCTGC ACGGACTCGC GATCACCGAC CACGACGGTT TCTACGGCGC CCCCCTGTTC 
GCCGAGACCG CGCAGCTGCA CGCCACGAAC GAGCAGAGCC TCAAGACGGC GTACGGCGCC 
GAGCTCTCCC TCGGCCTGAC CCGGCCGCAG CACGGTGTCG CCGACCCCGA GGGCGGGCAC 
CTGCTGGTGC TGGCCCGCGG TGTCGAGGGT TACCACCGGC TCGCCGGGGC GATCACCGAC 
GCCCAGCTGC GCGGTGACGA GAAGGGCCGC CCCGTCTACG ACCTGGCCGA GCTGGCCGAG 
CGGGGACGCG ACCACTGGCT GGTGCTGACC GGCTGCCGCA AGGGCGCCGT ACGCCGGGCC 
CTCCTCGAGC ACGGACCCGT GGCCGCGGCG GCGGAGCTGG ACCGGCTGAC CGCGCTCTTC 
GGCCACGACA ACGTCGTGGT GGAGCTGATC GACCACGGCT ATCCCACCGA CTCCGCCCAC 
AACGACCTGC TCGCAGCCCT GGCGGCCGAC CACGGGTTGC GGGTGGTCGC CACCAACAAC 
GTCCACCACG CCCGTCCCGA GCAGCACCGG GTCGCCGACG CGATGGCGGC GGTCCGGGCC 
CGGCGCAGCC TGGCCGAGAT GGACGGCTGG CTGCCCGCGT CCGGGATGGC CTGCCTGCGG 
TCGGGGGAGG AGATGGTGCG CCGGTTCGCC CGCTATCCCG GCGCGGTGGC GCGCAGCGTC 
GAGCTCGCTG ACGAGATCGT CTTCGACCTG CAGAAGGCCA CGCCACGGCT GCCCAAGGAC 
GGCATCCCTG CTGGGCACAC GCCGTCCACC TGGCTGCGCG AGCTGACCGA GCGGGGCTTC 
GCGCAGCGGT ACGCCGGCGG GCCGCTCGAG ACGCGGGCCC GCGCGAGCGT CGAGCACGAG 
CTGCGGATCA TCGCCGAGAA GGACTTCGAC GGCTACTTCG TGATCGTCCA CGACATCGTG 
GCGTTCGCGC GTTCGCGGGG GATCCTGTGC CAGGGCCGGG GATCGGCGGC GAGCTCGGCG 
GTCTGCTACG CGCTCGGCAT CACCGCGATC GATCCGGTCT TCTACCGGCT GCCGTTCGAG 
CGGTTCATCT CCCAGCATCG CGACGAGGAG CCCGACATCG ACGTGGACTT CGACGCAGGC 
CGGCGCGAGG AGGTGATCCA GTGGGTCTAC GAGCGCTACG GCCGCCACAA CGCCGCGCAG 
GTCGCGAACG TCGTCGGCTA CCGCCCCAAG ATGGCGGTCC GCGACGCGGC CAAGGCGCTG 
GGGCACTCCC CAGGCCAGCA GGACGCCTGG TCCAAGCAGG TCACGTCGTG GACGACCGTG 
GCCACGCGGG ACGGCGGCGA GCACCCCGCT GATCTCCACG TACCCGCTCC GGTCGTCGCG 
CTCGCCAACG GCTTCCTCGG GGCACCGCGC CACCTCGGCA TCCACTCCGG CGGGATGGTG 
CTCACCGAGC GGCCGATCGG CGAGGTGGTG CCGATCGAGC GGGCCCGGAT GGACAAGCGC 
ACGGTGCTGC AGTGGGACAA GGACGGCTGC GAGTACATGG GGCTGGTGAA GTTCGACCTG 
CTCGGGCTGG GGATGCTCAG CGCGCTGGAC CACATGATGC GGATCGTCGA GGAGCACCTC 
GGCGAGCGCT GGGAGCTGAG CACCATCCCC AAGGAGGAAC CGGCGGTCTA CGACCTGCTC 
TGCCGGGCCG ACTCGGTCGG GGTGTTCCAG GTCGAGAGCC GGGCCCAGAT CGGCACGCTG 
CCGCGGCTGC GGCCCCGGGA GTTCTACGAC CTGGCGATCG AGATCGCGCT GATCCGGCCC 
GGCCCGATCC AGGGCGGCGC GGTGCACCCC TACATCCGGC GGGCCACCGG TCGGGAGGAG 
GTCGAGTACG CCCACCCGTC GCTGGTGCCG GTGCTCGAGC GCACCAAGGG GGTGCCGCTG 
TTCCAGGAGC AGCTGATGGA CATGGCCCGG GTGCTCGGCG ACTGCACCCG CGACGAGGCC 
GACCTGCTGC GCCGGGCGAT GGGCTCCAAG CGCGGCATCG AGCGGATCGA GAGCATCAAG 
GACAAGCTCT ACGAGGGGAT GGCCCGCAAG GGCCTGGTCG GCGAGGAGGC CGACGCGATC 
TACCTGAAGA TCCTCTCCTT CGCGAACTTC GGCTTCGCCG AGAGCCATGC GCTGTCCTTC 
GCCAAGCTCG TCTACGCCAG CTCGTGGTGC AAGCTGCACT ACCCCGGCGC GTTCCTCGCC 
GCGCTGCTGC GGGCCCAGCC GATGGGGTTC TACTCGCCGC AGTCGCTGGT GCACGACGCC 
CGGCGGCACG GCGTCGAGGT GCTGCGCCCC GACCTGGTCC GCTCCGCGGC GAGCGCCGAC 
CTCGAGCCGC TGGCCGTGGC GGACGGGCCG GTGGGGCTGC CCAGGTGCCT GGTCGACCAT 
CCCGAGCGGA CCGACTGGGT CCCCGGCACG CCGGATCCGA CCCCGGCACA CCGGCGGGAC 
GCGGCGTACG CCGTACGTCT CGGGCTGGAC GCGGTCCGCG GCATCAGCGC CGTCGTGGCC 
GAGCGGATCG TCGCCGCCCG GGCCGAGCGC CCGTTCGCCG ACCAGGCCGA CCTGTCGCGG 
CGGGCCGGCC TGGATGCTCG TCAGCTGGAG GCGCTGGCCA CGGCCGGTGC CTTCGACGAG 
GCGTTCCCCG GCGGCGGCCT GTCGCGCCGC CAGGCGCTGT GGAACGCCGG CTGGACCGAG 
AGCGAGGAGC ACCTCGAGGG CATCCGGGCC GCCGGGCCGG CGCCGATGCT CCCCGAGATG 
GACGAGGTCG AGGTCACCAT GGCCGACCTG TGGGCCACGG GGATCACGCC TGCGCAGCAC 
CCGTTCGGCC ACCTGCGCGA GCGGCTGCGC GCCGCGGGCA TCAAGTCGGT GGCCGACACG 
GCGAGCGCCG AACCGGGTCG GCGGGTGCAC GTCGCCGGCC TGGTCACGCA CCGCCAGCGG 
CCGGGCACCG CCGGCGGCGT CACGTTCCTC AACCTCGAGG ACGAGACCGG GATGCTCAAC 
GTGATCTGCA CCGTCGGGGT GTGGCGGCGA CACCGCGCCA CCGCCGCCGG CGCGGCCGGG 
ATGGTGGTCC GCGGCATTCT CGAGCGCCAG GACGGCGTCA CCAACCTGGT CGCCGACCGG 
CTCGCCCCGA TCGAGTCGGT CCACCCCGAG GCCGGCCAGG CCCTGCGCGC CCGGCACCGC 
TCCCGCGACT TCCAGTGA 

 

Protein sequence

MGWSNPPISW GELEKRLSGR LSTPQDPEAP ISTRKRKRTR VDVARPAGPV TPYAELHCHS 
SFSFLDGASG PDHLVLEALR LGLHGLAITD HDGFYGAPLF AETAQLHATN EQSLKTAYGA 
ELSLGLTRPQ HGVADPEGGH LLVLARGVEG YHRLAGAITD AQLRGDEKGR PVYDLAELAE 
RGRDHWLVLT GCRKGAVRRA LLEHGPVAAA AELDRLTALF GHDNVVVELI DHGYPTDSAH 
NDLLAALAAD HGLRVVATNN VHHARPEQHR VADAMAAVRA RRSLAEMDGW LPASGMACLR 
SGEEMVRRFA RYPGAVARSV ELADEIVFDL QKATPRLPKD GIPAGHTPST WLRELTERGF 
AQRYAGGPLE TRARASVEHE LRIIAEKDFD GYFVIVHDIV AFARSRGILC QGRGSAASSA 
VCYALGITAI DPVFYRLPFE RFISQHRDEE PDIDVDFDAG RREEVIQWVY ERYGRHNAAQ 
VANVVGYRPK MAVRDAAKAL GHSPGQQDAW SKQVTSWTTV ATRDGGEHPA DLHVPAPVVA 
LANGFLGAPR HLGIHSGGMV LTERPIGEVV PIERARMDKR TVLQWDKDGC EYMGLVKFDL 
LGLGMLSALD HMMRIVEEHL GERWELSTIP KEEPAVYDLL CRADSVGVFQ VESRAQIGTL 
PRLRPREFYD LAIEIALIRP GPIQGGAVHP YIRRATGREE VEYAHPSLVP VLERTKGVPL 
FQEQLMDMAR VLGDCTRDEA DLLRRAMGSK RGIERIESIK DKLYEGMARK GLVGEEADAI 
YLKILSFANF GFAESHALSF AKLVYASSWC KLHYPGAFLA ALLRAQPMGF YSPQSLVHDA 
RRHGVEVLRP DLVRSAASAD LEPLAVADGP VGLPRCLVDH PERTDWVPGT PDPTPAHRRD 
AAYAVRLGLD AVRGISAVVA ERIVAARAER PFADQADLSR RAGLDARQLE ALATAGAFDE 
AFPGGGLSRR QALWNAGWTE SEEHLEGIRA AGPAPMLPEM DEVEVTMADL WATGITPAQH 
PFGHLRERLR AAGIKSVADT ASAEPGRRVH VAGLVTHRQR PGTAGGVTFL NLEDETGMLN 
VICTVGVWRR HRATAAGAAG MVVRGILERQ DGVTNLVADR LAPIESVHPE AGQALRARHR 
SRDFQ