| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1843 |
|---|
| Symbol | |
|---|
| ID | 4597163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1967130 |
|---|
| End bp | 1968479 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639776442 |
|---|
| Product | MmgE/PrpD family protein |
|---|
| Protein accession | YP_923041 |
|---|
| Protein GI | 119716076 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.279739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA TCCTCGACAC CATGACCGAG TGGGCCGCGG AGCTCACCTG GGACGACCTG
CCCGAGGAGG TCCGGGAACG GGCCGGCTTC GCGCTGACCG ACACAGTGTC CACGATGGTC
GGCGGCGCTC CGACCGCGGC GGCGGTCATC GCGCTCGACT ACGCCGCCAC GGCCGGCGGC
TCCGCGCCGC TGGTCGGGCG GGGGGCCGCG ACCACCCCGG CCAACGCGGC CTTCGGCAAC
GGCGTCGCGG CGAGCGCGCT CGACTTTGAC GACGGGCACT ACCTCGCGGG CGCCATCCAC
CCTGGTTCCG TGATCGTCCC GGCGGTGCTC GCGGTCGCCG ACTCCGTGAC CACGGTCGCC
GACGCACTCG TCGCGCAGGT CGTCGGCTAC GAGATCGGCC TGCGGGCCGC GGCGATGCTC
TGGCCCAAGC ACGACCTGGA CCACTACCAC GCCACCGGCT GCGCCGGAGC GATCGGCGCC
GCGGCCGCGG CCGCCAAGCT GCTCGGGCTG GACGCCGACG GCCTCGCTTG CGCGATCAAG
ATCTCCTGGC TGCACGCACC GATGTCGACC TTCGGCACGC CGATGGTCAA GGAGTCGATC
GGCTGGGGTG CGTCCACGGG CGTCGCGGCG GCACAGCTCG CCGAGGCCGG CTTCATGAAG
GTCCCGGAGG GCTACGACAT CCCGGCCAAC GAGGTGCTCC CGCCGTCGCC GTTCCACCAG
CCAGGCGCGG CCGAGGACCC CTTCGTGACC AGCATCGGCA CCCGCTACGA GGTGCTGCAC
ACCTACTTCA AGTCCTTCGG CGCGTGCCGC TACACGCACG CCGCCGGAGC GGGCCTGCTC
TCCCTGCTCG CCGAGCACGG CATCGCCGCG GCCGACATCG CCCGCATCCG GGTGGGCACG
CACAAGGCGG CGACCTTCCT CGACGAGGTG GCGCCCAGGA CCATCGACAC GGCGCAGTAC
AGCTTCCCGA TCGTGCTCGC CTCGCTCGCT CTGTGGGGCG CTGCTGGAGC CGAGGAGATG
GACGCGTCCC GGCTCGACGA CCCGGAGCGG CTCGCGCTCG CCGGCAAGTT CAGCCTCGAG
CACGACGCCG ACCTCGACCA GCACTACCCG GCGCGCTACC CGAGCCGGGT CGAGGTCGAG
ACGACCGACG GCCGTACCGT TCGCGGCGTC TACCTGGACG GTCCCGGCGA CCCGGGCACC
TCGTTCGGAC CGGCCGAGCT CAGGCAGAAG TGGCAGCGGC TTCTCGGCGC GATGCTCGGC
GAGACGGGCG CCCAGGGTGT GCTGACCGGA CTCGGCGACC CCACGTCGAC GCTGCACGCC
GTCCTGGTGC CCGTGTGGGG GAGCAAGTGA
|
|---|
| Protein sequence | MTDILDTMTE WAAELTWDDL PEEVRERAGF ALTDTVSTMV GGAPTAAAVI ALDYAATAGG
SAPLVGRGAA TTPANAAFGN GVAASALDFD DGHYLAGAIH PGSVIVPAVL AVADSVTTVA
DALVAQVVGY EIGLRAAAML WPKHDLDHYH ATGCAGAIGA AAAAAKLLGL DADGLACAIK
ISWLHAPMST FGTPMVKESI GWGASTGVAA AQLAEAGFMK VPEGYDIPAN EVLPPSPFHQ
PGAAEDPFVT SIGTRYEVLH TYFKSFGACR YTHAAGAGLL SLLAEHGIAA ADIARIRVGT
HKAATFLDEV APRTIDTAQY SFPIVLASLA LWGAAGAEEM DASRLDDPER LALAGKFSLE
HDADLDQHYP ARYPSRVEVE TTDGRTVRGV YLDGPGDPGT SFGPAELRQK WQRLLGAMLG
ETGAQGVLTG LGDPTSTLHA VLVPVWGSK
|
|---|
| |