Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1808 |
Symbol | |
ID | 4597645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1922208 |
End bp | 1923923 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639776407 |
Product | trehalose synthase |
Protein accession | YP_923007 |
Protein GI | 119716042 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0813826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAGG GGCTCACGCC GGACCCTCCT GAGAACAACC CCGACTGGTT CAAGAGCGCG GTCTTCTACG AGGTCCTCGT CCGGTCCTTC CGCGACTCCA ACGCCGACGG CACCGGCGAC TTCCGCGGGC TGGTCGAGCA GCTGGACTAC CTCCAGTGGC TCGGCGTGGA CTGCCTGTGG ATCCCGCCGT TCTTCCCGAG CCCGCTGCGC GACGGCGGCT ACGACGTGGC GGACTACACC GGGGTGCTCC CGGAGATCGG CACGATCGAG GACTTCCGCT ACTTCCTCGA CGAGGCGCAC CAGCGCGGCC TGAAGGTCAT CATCGACTTC GTCATGAACC ACACGAGCGA CCAGCACCCG TGGTTCCAGG CCTCCCGGTC CGACCCGCAG GGGCCGTACG GCGACTTCTA CGTCTGGTCC GACACCGACG AGCTCTACGA GGAGGCGCGG ATCATCTTCG TCGACACCGA GCCGTCGAAC TGGACGTGGG ACCCGGTCCG CCAGCAGTAC TTCTGGCACC GCTTCTTCTC CCACCAGCCC GACCTCAACT TCGACAACCC CGCCGTCCAC GACGCGATGC TCGACGCGAT CCGGTTCTGG CTCAACATGG GTCTGGACGG CTTCCGCCTC GACGCGGTGC CCTACCTCTA CGAGCGGCCG GGCACCAACG GCGAGAACCT CCCTGAGACC CACGAGATGC TCAAGAAGGT CCGCAAGGTC GTCGACGACG AGTACCCGGG CCGGATCCTC CTCTGCGAGG CCAACCAGTG GCCGCAGGAC GTCGTGGAGT ACTTCGGCGA CTTCGCGGTG GGCGGTGACG AGTGCCACAT GGCCTTCCAC TTCCCGGTGA TGCCGCGCAT CTTCATGGCG GTGCGCCGGG AGTCCCGGTT CCCGATCTCG GAGATCCTCG AGCAGACCCC CGCGATCCCC GAGAACTGCC AGTGGGGCAT CTTCCTGCGC AACCACGACG AGCTCACCCT CGAGATGGTC ACCGACGAGG ACCGCGACTA CATGTGGGGC GAGTACGCCA AGGATCCCCG GATGAAGGCG AACATCGGCA TCCGCCGGCG GCTGGCGCCC CTCCTCGACA ACGACACCAA CCAGATGGAG CTCTTCAACG CGCTGCTGTT CTCGCTGCCG GGCTCCCCGG TCCTCTACTA CGGCGACGAG ATCGGCATGG GCGACAACAT CTGGCTCGGC GACCGGGACG GGGTGCGCAC CCCGATGCAG TGGACCTCGG ACCGCAACGC CGGATTCTCC TCGGCCAACC CCGGCAAGCT GGACCTGCCG CTCATCCAGG ACCCGGTCTT CGGGTACCAG TCGGTCAATG TGGAGGCCCA GCTCGAGAAC ACCTCGTCCC TGCTGCACTG GATGCGCCGG ATGATCCACG CCCGCCGCAA CCACCCCGCG TTCGGGCTCG GGACCTTCCA CGACCTGGGT GGCTCGAACT CGACCGTGCT GTCCTACGTG CGGGAGTACA CCACCGAGGA CGGCTCCGAG GACATCATCC TGTGCGTCAA CAACCTCTCC CGGTTCCCCC AGCCGGTCGA GCTGGACCTG CGCCGGTTCG AGGGCCGGCG GCCCGTCGAG CTGATCGGTG GAGTCCCGTT CCCGGAGATC GGCGAGCTGC CCTACCTCCT CACCCTGGCG GGGTACGGCT TCTACTGGTT CCGCCTGACC GCTCCCGAGA CCAGCGAGGA GGGGCTGCTG CTGTGA
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Protein sequence | MTQGLTPDPP ENNPDWFKSA VFYEVLVRSF RDSNADGTGD FRGLVEQLDY LQWLGVDCLW IPPFFPSPLR DGGYDVADYT GVLPEIGTIE DFRYFLDEAH QRGLKVIIDF VMNHTSDQHP WFQASRSDPQ GPYGDFYVWS DTDELYEEAR IIFVDTEPSN WTWDPVRQQY FWHRFFSHQP DLNFDNPAVH DAMLDAIRFW LNMGLDGFRL DAVPYLYERP GTNGENLPET HEMLKKVRKV VDDEYPGRIL LCEANQWPQD VVEYFGDFAV GGDECHMAFH FPVMPRIFMA VRRESRFPIS EILEQTPAIP ENCQWGIFLR NHDELTLEMV TDEDRDYMWG EYAKDPRMKA NIGIRRRLAP LLDNDTNQME LFNALLFSLP GSPVLYYGDE IGMGDNIWLG DRDGVRTPMQ WTSDRNAGFS SANPGKLDLP LIQDPVFGYQ SVNVEAQLEN TSSLLHWMRR MIHARRNHPA FGLGTFHDLG GSNSTVLSYV REYTTEDGSE DIILCVNNLS RFPQPVELDL RRFEGRRPVE LIGGVPFPEI GELPYLLTLA GYGFYWFRLT APETSEEGLL L
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