| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1806 |
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| Symbol | |
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| ID | 4597643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1918499 |
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| End bp | 1920748 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639776405 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_923005 |
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| Protein GI | 119716040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA AGTCCACCCC CCGGACCACC TCCGAGCCGG CCCCGGCGAG CGGCCCCGCG
CTGCATCCGG TGTCGACCGC CGAGCTGCAC CAGGTCGCGC ACGGCGAGCA CGGCAACCCG
CACGGCGTGC TCGGCCCCCA TCCGCACGAC GGCGGCGTCA CCGTGCGGGT GCTCCGGCCC
CTGGCCTCCC GTGTCGTCGT GCGGTGGAGC GACGGGTCCG GCACCTCCGG CGAGGCCGAG
CTGGCCCACG AGCACGAGGG CATCTGGGCG GGCGTGATCG CGCTGCCCGA CGTGCCCGAC
TACCGGGTGG CGGTCAGCTA CGGCCCCGAC GAGCACGTGG TCGACGACCC CTATCGCTTC
TTGCCGACTC TCGGCGAGAT GGATCTGCAC CTGATCAACG AGGGCCGCCA CGAGCTGCTC
TGGACCGTGC TCGGCGCCCG GGTGCACCGC TATCCGGGCG CGCTCGGGCC GGTGACCGGC
ACGTCGTTCG CGGTGTGGGC GCCCTCGGCG CGGGCGATCC GGATCAAGGC CGACTTCAAC
AGCTGGGACG GGCGCGAGCA CCCGATGCGC CAGCTCGGGA CCTCCGGTGT GTGGGAGCTG
TTCGTGCCGG ACGTCGGCGC CGGGACGTCG TACAAGTACA CGATCCTGGG CCCGGACGGG
CAGTGGCGCG AGAAGGCCGA CCCGATGGCC CGCTGGGCCG AGAAGCCCGC CGACACGGCC
TCGCGGGTCT TCGAGTCCGG CTACACCTGG AACGACGACG TCTGGCTCGA GGCCCGGGCG
CGCCGCGCGC CGGTCGCCTC CCCGATGAGC ATCTACGAGA TGCACCTCGG GTCCTGGAAG
AAGCACCCCG ACGGCCGGTA CTGGTCCTGG GCCGAGCTCG CCGAGGAGCT GCCGGCGTAC
GTCGCGGGCC TGGGCTTCAC CCACGTCGAG CTGATGCCGG TGATGCAGCA CCCGTTCGGC
GGCTCGTGGG GCTACCACGT GACGTCGTAC TTCGCCCCGG ACGCGCGGTT CGGCGACCCC
GACGGCTTCC GGCTGCTCGT CGACCGGCTG CACCAGGCCG GCGTCGGCGT GATCCTGGAC
TGGGTGCCCG GGCACTTCGC CACCGACGAG TGGGCGCTGG CCCGCTTCGA CGGCACGCCG
CTCTACGAGG ATCCCAACCC CCAGCGCGGC TGGCACAAGG AGTGGGGCTC GCACATCTTC
AACTTCGGGC GCCGCGAGGT CCGCAACTTC CTCTACGCGA ACGCGCTGTA CTGGCTCGAG
GAGTTCCACG CCGACGGCCT GCGGGTCGAC GGCGTCGCGT CGATGCTCTA CCTGGACTAC
GCCCGCGAGC CCGGGGAGTG GACGCCCAAC ATCCACGGCG GCCACGAGAA CCTCGAGGCG
GTGCAGTTCC TCCAGGAGAT GAACGCCACC GTCTACAAGC GGGTCCCGGG CATCACCACG
ATCGCCGAGG AGTCGACGTC CTGGCCCGGC GTGACCAGGC CGACCTCGGC CGACGGGCTG
GGGTTCGGCT TCAAGTGGAA CATGGGCTGG ATGCACGACA CGCTGGACTA CCTCGCCCGC
GAGCCGGTGC ACCGGGCCTA CCACCACGGG GAGATGACGT TCTCGCTCGT CTACGCCTGG
TCGGAGAACT ACGTGCTGCC GATCAGCCAC GACGAGGTCG TCCACGGCAA GGGCTCGCTG
CTGCGCAAGA TGCCCGGCGA CCGCTGGCAG CAGCTGGCCA ACCTGCGCGC CTACCTCGGC
TTCATGTGGG CCCACCCCGG CAAGCAGCTG CTGTTCATGG GCGCCGAGCT CGGCCAGGAG
TCGGAGTGGG CGGAGTCGCG CGAGCTGGAC TGGTGGCTGC TCGACCACCC CGAGCACCGC
GGCGTGCAGG CCCTGGTGCG CGACCTGAAC GCGACGTACG TCGACTCCCC GGCGTTGTGG
GCCCGCGACC ACGAGCCCGA GGGCTTCACC TGGATCGACG CCAACGACGC CGGCCGCAAC
GTCTTCTCGT TCGTCCGGCG CGGCGGCGAC GCCGACCTGG TGTGCGTGTC GAACTTCGCG
GCCGTCCCCC ACGACGACTA CCGGCTGGGG CTGCCCGCCG CCGGCGTGTG GGACGAGGTG
CTCAACACCG ACGCGGAGAC CTACAGCGGC TCCGGGGTCG GCAACCTCGG CTCGGTCACC
GCGGTCGAGG GCGAGTGGTC GGGCCAGCCC GCCCACGCCA CCCTCGTGGT GCCGCCGCTG
GCGACGGTGT GGTTGCGCCG ACGACACTAG
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| Protein sequence | MSDKSTPRTT SEPAPASGPA LHPVSTAELH QVAHGEHGNP HGVLGPHPHD GGVTVRVLRP
LASRVVVRWS DGSGTSGEAE LAHEHEGIWA GVIALPDVPD YRVAVSYGPD EHVVDDPYRF
LPTLGEMDLH LINEGRHELL WTVLGARVHR YPGALGPVTG TSFAVWAPSA RAIRIKADFN
SWDGREHPMR QLGTSGVWEL FVPDVGAGTS YKYTILGPDG QWREKADPMA RWAEKPADTA
SRVFESGYTW NDDVWLEARA RRAPVASPMS IYEMHLGSWK KHPDGRYWSW AELAEELPAY
VAGLGFTHVE LMPVMQHPFG GSWGYHVTSY FAPDARFGDP DGFRLLVDRL HQAGVGVILD
WVPGHFATDE WALARFDGTP LYEDPNPQRG WHKEWGSHIF NFGRREVRNF LYANALYWLE
EFHADGLRVD GVASMLYLDY AREPGEWTPN IHGGHENLEA VQFLQEMNAT VYKRVPGITT
IAEESTSWPG VTRPTSADGL GFGFKWNMGW MHDTLDYLAR EPVHRAYHHG EMTFSLVYAW
SENYVLPISH DEVVHGKGSL LRKMPGDRWQ QLANLRAYLG FMWAHPGKQL LFMGAELGQE
SEWAESRELD WWLLDHPEHR GVQALVRDLN ATYVDSPALW ARDHEPEGFT WIDANDAGRN
VFSFVRRGGD ADLVCVSNFA AVPHDDYRLG LPAAGVWDEV LNTDAETYSG SGVGNLGSVT
AVEGEWSGQP AHATLVVPPL ATVWLRRRH
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