| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1772 |
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| Symbol | |
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| ID | 4597684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1881141 |
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| End bp | 1883183 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639776372 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_922972 |
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| Protein GI | 119716007 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.292142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGA AGGACGGCGC TCCGACGGAT CGTGGCCCCG AGGGTCGTGC CCCGAAGGAC
CGACCCTGGG TGATGCGCAC CTACGCCGGG CACTCGACGG CGGCGGCGTC CAACGCGCTC
TACCGGACCA ACCTCGCGAA GGGGCAGACC GGGCTCTCGG TCGCCTTCGA CCTGCCGACC
CAGACCGGCT ACGACCCGGA CTCGCCGCTC GCGCGCGGCG AGGTGGGGAA GGTCGGCGTC
CCGGTGCCGC ACCTGGGCGA GATGCGCCGG CTGTTCGAGG ACATCCCGCT GACCTCGATG
AACACCTCGA TGACGATCAA TGCCACCGCG ATGTGGCTGC TGGCGATGTA CCAGGTGGTC
GCCGAGGAGC AGAACCCGGA GCTGAGCCCC GAGGAGGTCG CCGCCCAGCT CGCCGGCACC
ACCCAGAACG ACATCATCAA GGAGTACCTC TCCCGCGGGA CCTACGCGTT CCCTCCCGAG
CACTCGATGC GGCTGATCGC CGATGTCATC TCGTACACGG TCCACCAGAT CCCGCAGTGG
AACCCGATCA ACATCTGCAG CTACCACCTG CAGGAGGCCG GGGCGACGCC CACGCAGGAG
CTCGCGTACG CGCTGTGCAC CGCGATCGCC GTCCTCGACG CGGTCAAGAG CTCGGGCCAG
GTCGACGAGG CGGACTTCGG ACGCGTCGTC GGCCGGATCT CCTTCTTCGT CAACGCCGGC
GTCCGCTTCG TCGAGGAGAC CTGCAAGATG CGGGCCTTCG GCCGGCTCTG GGACGAGATC
ACCCGGGAAC GGTACGGCGT CGAGGACCCC AAGATGCGTC GGTTCCGGTA CGGCGTGCAG
GTCAACTCGC TGGGCCTCAC CGAGGCCCAG CCTGAGAACA ACGTGCAGCG GATCGTGCTC
GAGATGCTCG GCGTCACGCT CTCCAAGAAC GCTCGCGCGC GGGCGCTCCA GCTGCCGGCG
TGGAACGAGG CCCTGGGCCT GCCGCGGCCC TGGGACCAGC AGTGGTCGCT GCGTCTCCAG
CAGGTGCTGG CCTATGAGTC CGACCTGCTC GAGTACGACG ACATCTTCGA CGGCTCGCAC
GTGATCGAGG CGAAGGTCGC GGAGCTGGTC GCGGGCGCCC GCGCCGAGAT CGACCGGGTC
CAGGCGATGG GCGGCGCGAT CGCGGCAGTC GAGTACATGA AGCAGGAGCT GGTCTCCTCG
CACGCCGCGC GGCGCGCGCG GATCGAGTCC GGCGAGGAGA TCGTCGTCGG CGTCAACAAG
TTCGAGACCA CCGAGCCGTC GCCGCTGACC TCCGACCTCG ACAGCGCGAT CATGACGGCG
GACCCCGACG CGGAGCAGGC CGCGATCGCC AGCGTCGAGG CGTGGAAGGC GCAGCGCGAC
GAGGACGAGG TCGCCGCAGC GCTCGCCCAG CTGGCCGAGG CTGCCAAGAC CGACACGAAC
CTGATGGGGC CGACCCTGGT GGCCGCTCGC GCCGGAGCGA CCACGGGGGA GTGGTCCGCC
ACGCTGCGCG AGGTCTTCGG CGAGTACCGG GGCCCGACGG GCGTCAGCGG TGCGGTCGGC
GTCGCGGAGG CGGGCGCGGA GCTCGCAGCC GTGCGGGACC GGGTGCGTGA GACGGCGCAG
GAGCTGGGTG GCCGGCTGCG CCTGCTGGTC GGCAAGCCCG GTCTCGACGG CCACTCCAAC
GGCGCCGAGC AGATCGCGGT GCGCGCCCGG GACGCGGGGT TCGAGGTCGT CTACCAGGGC
ATCCGGCTGA CCCCCGAGCA GATCGTCGCC GCGGCCGTCG CCGAGGACGT CCACTGCGTC
GGGCTGTCGA TCCTCTCCGG ATCACACATG GAGCTGGTCC CGGCCGTGCT CGACGGGCTG
CGTGAGGCGG GGATGGGGGA CGTACCCGTC GTGGTCGGCG GCATCATCCC CGAGTCGGAC
GGCCGCCGCC TGGGCGAGCT CGGCGTCGCG GCGGTCTTCA CGCCCAAGGA CTTCGGCCTG
ACCGAGATCA TGGGCGGGAT CGTCGACGTG ATCCGCGCGG CCAACGGGCT GGACGAAGGT
TAG
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| Protein sequence | MTEKDGAPTD RGPEGRAPKD RPWVMRTYAG HSTAAASNAL YRTNLAKGQT GLSVAFDLPT
QTGYDPDSPL ARGEVGKVGV PVPHLGEMRR LFEDIPLTSM NTSMTINATA MWLLAMYQVV
AEEQNPELSP EEVAAQLAGT TQNDIIKEYL SRGTYAFPPE HSMRLIADVI SYTVHQIPQW
NPINICSYHL QEAGATPTQE LAYALCTAIA VLDAVKSSGQ VDEADFGRVV GRISFFVNAG
VRFVEETCKM RAFGRLWDEI TRERYGVEDP KMRRFRYGVQ VNSLGLTEAQ PENNVQRIVL
EMLGVTLSKN ARARALQLPA WNEALGLPRP WDQQWSLRLQ QVLAYESDLL EYDDIFDGSH
VIEAKVAELV AGARAEIDRV QAMGGAIAAV EYMKQELVSS HAARRARIES GEEIVVGVNK
FETTEPSPLT SDLDSAIMTA DPDAEQAAIA SVEAWKAQRD EDEVAAALAQ LAEAAKTDTN
LMGPTLVAAR AGATTGEWSA TLREVFGEYR GPTGVSGAVG VAEAGAELAA VRDRVRETAQ
ELGGRLRLLV GKPGLDGHSN GAEQIAVRAR DAGFEVVYQG IRLTPEQIVA AAVAEDVHCV
GLSILSGSHM ELVPAVLDGL REAGMGDVPV VVGGIIPESD GRRLGELGVA AVFTPKDFGL
TEIMGGIVDV IRAANGLDEG
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