Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1689 |
Symbol | |
ID | 4599728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1796110 |
End bp | 1797438 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639776288 |
Product | amino acid permease-associated region |
Protein accession | YP_922889 |
Protein GI | 119715924 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.936945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGTGA CCCAGGCCCC GGGCCCGACC CATTCGTTGA CCCCCGATCC GCTGCCCGCC CACGACCCGC TGGCCGAGGG CGGACTCGGG GTGTCCCAGG GCGCGGCACT CACGCTCGGG GCGGTCCTGG GGACGGGCGT GATCTCGCTG CCGGCGCTGG CCGCGCACGA GGCGGGCCCG GCCTCGCTGG TCGCCTGGCT GGCCCTGGTG CTGCTGTCGG TCCCGCTGGC AAGCACGTTC GCCGCGCTCG GCGCACGCTA CCCGGACGGT GGCGGCGTCT CGACGTACGC CCGGCGCGCC TTCGGCGCCC GGGTCGCGAC CCTGGTCGGC TGGTGCTTCT ACTTCGCGAT CCCGCTCGGC GCCCCGGCGG CGGCCGGCTT CGCCGGGGCG TACGTCGCGG ACAGCGCCGG CGGCGGCCGG CAGACCCAGC TGGTGACCGC GGGGCTGCTG ATCGGCGCGG TGGCGGTGAT GAACTGGTAC GGGATCCGGG TCTCCGGGCG GGTGCAGCTC GCGATCGCGG CGACCCTGGC GGTGCTGCTG CTGGTCGCCA CGCTCGTGTC CCTCCCCCAT GCGGACGCGG GCCACCTCAC ACCGTTCGCA CCGCACGGCT GGGCCGCGGT CGGCTCCGCA GCGGCCCTGC TGATCTGGGC GTTCGCCGGC TGGGAGGTCG TCACGTCGCT CTCCTCGGAG TACCGGCACC CGGCCCGCGA CATCGGCCGT GCGACCGTGA TCGCGCTGGT CGTGATGGGC GTGCTGTACC TCGGCGTCGC GTTCGCGACC GTCGCGGTGC TCGGCGAGCA CACCAGCACC GCGCCGCTGT CCGACCTCCT GGTGCGCGGC TTCGGCGAGC CGGCCCGCGG CGTGACCACC GTCGTGGCGG TGCTGCTGTC GCTCGGCGCG ATGAACGCCT ACTTCGCGGG CAGCGCGCGG CTGGGCGCCG CCCTCGGGCG CGACGGGTCG CTGCCGGTGT GGTTCGCGCG CGGCTCGACG GCCGGCCAGG TGCCGCGGCG GTCCCTGGCC GTGGTGACCC TCGGCGCGCT CGGCACCCTG GGTGCTGTGG CGGTGACCGG CGTCCCCGTC GAGCGGACCA TGCTGCTGGT CACCGGTGCC TTCAGCCTGG TCTACGTGGT CGGCACCGCC GCCGCGATCC GACTGCTCCC GCCCGGCACC TGGGTCCGTC GCGGCGCCGG CGTCGCGTTC GCCTCGACGC TGGTGCTGCT CGGCCTCACC GGGCGCTACC TGCTGCCGCA GCTCCTGGTC GGCGCGGCCG CGGTGGCCTG GATGGCGTGG ACGCGACGAG CCGGGCGAGC CGCTCCAGAC CCGGCCTGA
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Protein sequence | MPVTQAPGPT HSLTPDPLPA HDPLAEGGLG VSQGAALTLG AVLGTGVISL PALAAHEAGP ASLVAWLALV LLSVPLASTF AALGARYPDG GGVSTYARRA FGARVATLVG WCFYFAIPLG APAAAGFAGA YVADSAGGGR QTQLVTAGLL IGAVAVMNWY GIRVSGRVQL AIAATLAVLL LVATLVSLPH ADAGHLTPFA PHGWAAVGSA AALLIWAFAG WEVVTSLSSE YRHPARDIGR ATVIALVVMG VLYLGVAFAT VAVLGEHTST APLSDLLVRG FGEPARGVTT VVAVLLSLGA MNAYFAGSAR LGAALGRDGS LPVWFARGST AGQVPRRSLA VVTLGALGTL GAVAVTGVPV ERTMLLVTGA FSLVYVVGTA AAIRLLPPGT WVRRGAGVAF ASTLVLLGLT GRYLLPQLLV GAAAVAWMAW TRRAGRAAPD PA
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