Gene Noca_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1615 
Symbol 
ID4599994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1714744 
End bp1715850 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID639776215 
Productphage integrase family protein 
Protein accessionYP_922816 
Protein GI119715851 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0481425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTGGA TCAAGACCCG GGTCACCGAC GACGGCGACA CACGGTTCGT TGCCTGCTAC 
CGCGACCCGG AGGGACGGCA ACGCTCCGCT GGCACCTTCT CCTCCCGGCG TGCCGCCGAA
CGCGCCGCCC ACCGGGAGGA GGCCAAGGTC AGGGAGGGCG CGTGGCACGA CCACTCCCGC
GGTCAGGTCA CCTTCGCCGA GTACGTCGAG ACCGTGTGGC TGCCGTCCAA GCACGTCGAG
ACCTCCACCT TGGCCGCCTA CCGCTCCTAC CTCGACAGGC ACTTCATCCC CACCTTCGGA
CGCCGGCCGA TGGGCAAGAT CCTGCCCTCG GAGATCCAGC GCTGGGTCAC CACCGCCACC
GAGCACGGCC TCTCGCCCGC CAGTGTGCGG AAGTACCACA CGATGCTGCA CTCGGTGTTC
GAACGAGCCC TGCGCGACCG GGTGGTCACC TTCAACCCCT GCGTCCACAC TGAGCTCCCG
AAGGTGGTCA AGAAGAAGGC CCGCACGCTC ACGCCCGAGG AGTACGTCGC CATCCTGACC
GCCCTCCCCG AACAGCATCG GCTGATGGTC GAGACCGCCA TCAACACCGG CCTCCGGTGG
GGTGAGCTCA TCGCGCTCAA GCCCCGTCAC CTCGACCTCA TCAAGCGCCA ACTGACGGTC
GAAGAGACAG TCGTGGAGGT TTCGATCAAG AACTCCCCCA CCGGCCACCG GATGCTCACT
AAGCCCTACC CCAAGGACAA CGAGGCCCGC ACCATGGGCC TCCCGGCAGA CCTCGTGGAT
CAGCTCGCCG ACTGGATCAC CACCCGGCGG CTCCGGCTAG ATGATCTGCT GTTCGCGACC
CGCGAGGGAA CCCCGATCTC ACGCAACACG TTCCGCACCC GCGTCTGGCT GCCCGCCATA
CGAGCGTCCG GAGTCGACTT CGACGTCCGC GTCCACGACC TCCGCCACGC ACACGCATCC
TGGCTCCTCG CAGGCGGCTC CGACCTCAAG TCCGTCATGG ACCGGATGGG CCACGCCCAG
ATCACCACCA CCCAGAAATA CCTGCATGCC CTTCCCGACG CCGACGCCAA GAACCTCGAC
GCCCTCAACC GCATCCGCAA TTCCTGA
 
Protein sequence
MAWIKTRVTD DGDTRFVACY RDPEGRQRSA GTFSSRRAAE RAAHREEAKV REGAWHDHSR 
GQVTFAEYVE TVWLPSKHVE TSTLAAYRSY LDRHFIPTFG RRPMGKILPS EIQRWVTTAT
EHGLSPASVR KYHTMLHSVF ERALRDRVVT FNPCVHTELP KVVKKKARTL TPEEYVAILT
ALPEQHRLMV ETAINTGLRW GELIALKPRH LDLIKRQLTV EETVVEVSIK NSPTGHRMLT
KPYPKDNEAR TMGLPADLVD QLADWITTRR LRLDDLLFAT REGTPISRNT FRTRVWLPAI
RASGVDFDVR VHDLRHAHAS WLLAGGSDLK SVMDRMGHAQ ITTTQKYLHA LPDADAKNLD
ALNRIRNS