Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1615 |
Symbol | |
ID | 4599994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1714744 |
End bp | 1715850 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639776215 |
Product | phage integrase family protein |
Protein accession | YP_922816 |
Protein GI | 119715851 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0481425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTGGA TCAAGACCCG GGTCACCGAC GACGGCGACA CACGGTTCGT TGCCTGCTAC CGCGACCCGG AGGGACGGCA ACGCTCCGCT GGCACCTTCT CCTCCCGGCG TGCCGCCGAA CGCGCCGCCC ACCGGGAGGA GGCCAAGGTC AGGGAGGGCG CGTGGCACGA CCACTCCCGC GGTCAGGTCA CCTTCGCCGA GTACGTCGAG ACCGTGTGGC TGCCGTCCAA GCACGTCGAG ACCTCCACCT TGGCCGCCTA CCGCTCCTAC CTCGACAGGC ACTTCATCCC CACCTTCGGA CGCCGGCCGA TGGGCAAGAT CCTGCCCTCG GAGATCCAGC GCTGGGTCAC CACCGCCACC GAGCACGGCC TCTCGCCCGC CAGTGTGCGG AAGTACCACA CGATGCTGCA CTCGGTGTTC GAACGAGCCC TGCGCGACCG GGTGGTCACC TTCAACCCCT GCGTCCACAC TGAGCTCCCG AAGGTGGTCA AGAAGAAGGC CCGCACGCTC ACGCCCGAGG AGTACGTCGC CATCCTGACC GCCCTCCCCG AACAGCATCG GCTGATGGTC GAGACCGCCA TCAACACCGG CCTCCGGTGG GGTGAGCTCA TCGCGCTCAA GCCCCGTCAC CTCGACCTCA TCAAGCGCCA ACTGACGGTC GAAGAGACAG TCGTGGAGGT TTCGATCAAG AACTCCCCCA CCGGCCACCG GATGCTCACT AAGCCCTACC CCAAGGACAA CGAGGCCCGC ACCATGGGCC TCCCGGCAGA CCTCGTGGAT CAGCTCGCCG ACTGGATCAC CACCCGGCGG CTCCGGCTAG ATGATCTGCT GTTCGCGACC CGCGAGGGAA CCCCGATCTC ACGCAACACG TTCCGCACCC GCGTCTGGCT GCCCGCCATA CGAGCGTCCG GAGTCGACTT CGACGTCCGC GTCCACGACC TCCGCCACGC ACACGCATCC TGGCTCCTCG CAGGCGGCTC CGACCTCAAG TCCGTCATGG ACCGGATGGG CCACGCCCAG ATCACCACCA CCCAGAAATA CCTGCATGCC CTTCCCGACG CCGACGCCAA GAACCTCGAC GCCCTCAACC GCATCCGCAA TTCCTGA
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Protein sequence | MAWIKTRVTD DGDTRFVACY RDPEGRQRSA GTFSSRRAAE RAAHREEAKV REGAWHDHSR GQVTFAEYVE TVWLPSKHVE TSTLAAYRSY LDRHFIPTFG RRPMGKILPS EIQRWVTTAT EHGLSPASVR KYHTMLHSVF ERALRDRVVT FNPCVHTELP KVVKKKARTL TPEEYVAILT ALPEQHRLMV ETAINTGLRW GELIALKPRH LDLIKRQLTV EETVVEVSIK NSPTGHRMLT KPYPKDNEAR TMGLPADLVD QLADWITTRR LRLDDLLFAT REGTPISRNT FRTRVWLPAI RASGVDFDVR VHDLRHAHAS WLLAGGSDLK SVMDRMGHAQ ITTTQKYLHA LPDADAKNLD ALNRIRNS
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