Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1535 |
Symbol | |
ID | 4595687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1629684 |
End bp | 1630727 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639776134 |
Product | putative surface antigen protein |
Protein accession | YP_922736 |
Protein GI | 119715771 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGCCC CACGCCGCCG AACCCGCCTC ATCGGCTTGG CGGTCGTCGC CCTGCTCGTC ACGCTCGCGG GAGGCGGTCT CGCCATCTGG TGGAAGCAGC GCGGGCCCTC CACCCTGGAC CTACCGATCA CCCAGGCCCG AGTGATACCG CTGACCGGCG ACAGCTCACG CTTCGACTAC GAGGACCTCG ACGCCGAACG AGGGCTGTTG TTCATCGCCC ACATGGGAGC AGGTCAGGTC ATCGAGGTCG ACGTACGCAC AGGCAAGGTC GTGCGCACCA TCGACGGGCT CGACGACGTC CACGGCGTGA TCGTCGTGCC GCAGCTTCAG CGGGTCTTCG CCACGGCCAC CGGGACCAAC GAGCTCGTCT CGCTCGACGA GGACACCGGC CGTGAACGCG GGCGTGCGCC GACCGACGCG TACCCCGACG GCCTGGCCTA CAACCCGGAC ACGAACACCG TCTGGACCAC CAACGAGGAC GCCGGCACCG AGACCGTCGT GGATGCCAAG ACCCTCGACG TGCGCGGCAG CGTCGAACTC GGCGACAGCG TCGGCAACGT CGCCTACGAC CCCGGCAGCC ACACCATGAT GGTCGGCGTC CAGTCCGACA ACGTCCTCGC CGTCATCGAC CCCAGCACCC TGCGCGTCGA ACGACGCGTC GACCTGCCCG GCTGCGACAC CAGCCACAGC CTGCGCATCG ACGCCGTCCG GCGCCTCGCG TTCGTCGGAT GCGAGGACAA CGACCGCCTG CTCACATTGG ACCTGAACAG CTGGATGATC ACCGGCAACG AGGAGGTCGG CGATTTCCCT GACGTGCTGA GCTACGACCA GGCAGACGGG CGACTCTGGG GTGCTGCCGA GAGCGGCTGG GTAACGATCC TCGAACTCGA CGGCCGTGCA ATCCAGGTCG TCGGCCGCGA CTTCCTGACC GACGGCGCAC ACGTCGTCGC CGTCGACCCG ACCAACCACC ACGCATACCT CCCCGTCCCT GATGGCGGCG ACCGACAGCC CGCGGTGCTC GACGAAGCGC CCGACGGCGG TTGA
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Protein sequence | MRAPRRRTRL IGLAVVALLV TLAGGGLAIW WKQRGPSTLD LPITQARVIP LTGDSSRFDY EDLDAERGLL FIAHMGAGQV IEVDVRTGKV VRTIDGLDDV HGVIVVPQLQ RVFATATGTN ELVSLDEDTG RERGRAPTDA YPDGLAYNPD TNTVWTTNED AGTETVVDAK TLDVRGSVEL GDSVGNVAYD PGSHTMMVGV QSDNVLAVID PSTLRVERRV DLPGCDTSHS LRIDAVRRLA FVGCEDNDRL LTLDLNSWMI TGNEEVGDFP DVLSYDQADG RLWGAAESGW VTILELDGRA IQVVGRDFLT DGAHVVAVDP TNHHAYLPVP DGGDRQPAVL DEAPDGG
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