| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1430 |
|---|
| Symbol | |
|---|
| ID | 4597198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 1514078 |
|---|
| End bp | 1515247 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639776028 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_922631 |
|---|
| Protein GI | 119715666 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.733862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACC CGGCGACACC CCCGACCGGC CGCCACCCCG GCAGCCACCC GGCCGGCCTG
GAGCTGCCCC GCACCATCGA CTACTCCCAG CGTCCGATGC TGGTGTTCTG GGAGGTCACC
CGCGCCTGCC AGCTGGCCTG CCGCCACTGC CGCGCCTCGG CGGCCCCCGA CCCGCTGCCC
GGTGAGCTGA CCGGCGCCGA GGGCCGGGCA CTGATCGACC AGGTCGCCGG GTTCGGCCGG
CCGTACCCGA TCCTGATCCT CACCGGCGGC GACTGCCTGC TCCGGCCGGA CGTCTTCGAG
ATGGTGGCCC ACGCCAACGG ACTCGGTGTC CCGGTCGCCA TGTCCCCCTC GGTGACCCCG
AGGCTCACGC CCGAGGCGAT CGACCAGATG GTGGCCGCCG GCGTGAAGGC GGTCTCGCTC
AGCCTGGACG GCGCCACCCC CGCGACCCAC GACGGCGTGC GCGGCATCCC CGGCCACTTC
GACCAGACCA TTCCCGCGAT CCGGGCGCTG GTCGCCGCCG GGCTGAAGGT GCAGGTCAAC
ACCACCGTGA TGCGGGCCAA CCTCCACGAG CTCGCCGACG TCGCGGCGAT CATGGCCGAG
ACCGGCGTGG CGATCTGGGA GGTGTTCTTC CTGGTGCACG TCGGTCGCGG AGAGGCCACC
GGTGCGATCA CGCCGGAGGA GCACGAGCAG GTGTGCCACT TCCTGTTCGA CTCCTCGCAC
TACGGCTTCA CGATCCGCAC GGTCGAGGCG CCGTTCTTCC GACGCGTGGT CGTGCAGCGC
AAGGCGGGCG GCCCGGCCCC GCAGCAGGCG CCGTACCTGC AGCTGCGCGA GCGCCTCGTC
GAGCGGCTCG GTCCGCCGGT CGGCCGGTCG ACCGCGCACA CGGTGTCGAC ACGCGACGGC
AAGGGGATCG TGTTCGTGGC CCACGACGGC CAGGTCTACC CGGCGGGGTT CCTGCCGCTG
CCGCTCGGCT CGGTGCGCGA CCATCCGCTG GTCGACATCT ACCGCGACAA CGAGGTGCTG
CGCAGCATCA GGGCGGCGGA GTTCGGCGGT CGGTGCGGGC GGTGCGAGTA CGCCGACCTC
TGCGGCGGCT CGCGCGCCCG GGCCTACGCC GACACCGGCG ACCCGCTCGC GGAGGACTCC
GCCTGCGTGT ACCAGCCCGC CCTGGCCTGA
|
|---|
| Protein sequence | MTHPATPPTG RHPGSHPAGL ELPRTIDYSQ RPMLVFWEVT RACQLACRHC RASAAPDPLP
GELTGAEGRA LIDQVAGFGR PYPILILTGG DCLLRPDVFE MVAHANGLGV PVAMSPSVTP
RLTPEAIDQM VAAGVKAVSL SLDGATPATH DGVRGIPGHF DQTIPAIRAL VAAGLKVQVN
TTVMRANLHE LADVAAIMAE TGVAIWEVFF LVHVGRGEAT GAITPEEHEQ VCHFLFDSSH
YGFTIRTVEA PFFRRVVVQR KAGGPAPQQA PYLQLRERLV ERLGPPVGRS TAHTVSTRDG
KGIVFVAHDG QVYPAGFLPL PLGSVRDHPL VDIYRDNEVL RSIRAAEFGG RCGRCEYADL
CGGSRARAYA DTGDPLAEDS ACVYQPALA
|
|---|
| |