Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1404 |
Symbol | |
ID | 4595877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1483846 |
End bp | 1484646 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639776002 |
Product | ABC transporter related |
Protein accession | YP_922605 |
Protein GI | 119715640 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTATT CCGCCAGCAC CTCGATCGTC GTCGACCACG CGACCAAGGA CTTCACGCTC CGCTACCACC GCACCTTCAA GCAGATGACG GTCGCCGCGC TGCGCCGGCA GAGCATCGCG GACTCCTTCC GGGCCGTCGA CGACGTCTCC TTCACGGTCC AGCAGGGCGA GTCCATCGGC CTGATGGGCC TCAACGGGTC GGGCAAGAGC ACGCTGCTCA AGCTGATCAA CGGCGTGATG CGCCCCGACA GCGGCCGGGT CCTGACCCGC GGGCGGATCT CGGGGCTGAT CGCCACCGGC GCCGGCTTCC ACCCCCAGCT GACCGGACGC GAGAACGTCT ACCTCAACGC GGCCGTGCTC GGCATGAGCG AGGCCGAGAC GCGGCGCAAG TTCGACGACA TCGCGGAGTT CGCCGACATC GGCAAGTTCC TCGACTCACC CGTCGGCCAC TACTCCTCGG GCATGTTCGC GCGGCTCGGG TTCGCCGTCG CCATCCACGT CGACTCCGAC ATCTTCCTCG CCGACGAGGT GCTGGCGGTG GGGGACAAGC CCTTCAAGCA GAAGTGCCTG CAGCGGATGC AGGAGATCCG CGACGGGGGG CGGACGCTCT TCTACGTCAG CCACGCCGCC GGCTCGGTGC GCAAGATGTG CGACCGGGTG ATCGTGCTGG AGCAGGGGCG CCTCGCCTTC GACGGCGGCG TCGACGAGGG CATCAAGTTC GTCAAGTACG ACGAGGAGAA GGCGACCGAC GAGGAGCTCG GCGTCGACGA CACCGACGAC GAGCTCGGCG CCGACATATA G
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Protein sequence | MTYSASTSIV VDHATKDFTL RYHRTFKQMT VAALRRQSIA DSFRAVDDVS FTVQQGESIG LMGLNGSGKS TLLKLINGVM RPDSGRVLTR GRISGLIATG AGFHPQLTGR ENVYLNAAVL GMSEAETRRK FDDIAEFADI GKFLDSPVGH YSSGMFARLG FAVAIHVDSD IFLADEVLAV GDKPFKQKCL QRMQEIRDGG RTLFYVSHAA GSVRKMCDRV IVLEQGRLAF DGGVDEGIKF VKYDEEKATD EELGVDDTDD ELGADI
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