| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1392 |
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| Symbol | |
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| ID | 4595865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 1467785 |
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| End bp | 1470718 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639775990 |
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| Product | PAS sensor protein |
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| Protein accession | YP_922593 |
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| Protein GI | 119715628 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.802774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCGC CGGACGACAG GACGACGCCC CGGCCGGCCG TGGCCGGGGT GGCGTGTGCC
GTCGTCGGCG TCGTCGGCCT CCACCTGGTC ACCCCCTCGG GCCGCACGGG TGACCTGACC
TACCTGGCCG GCGTCCTCGT CGCCGTCGCG ATCGCCTGGG TGGGCGTGCT CCGCCACCCG
GCGGGCCGGG GCGTCCCGCT GCTGGTGGCG ACGGCCGTCA GCGTGTCCGT GACAGGGGAC
GTGCTGGAGC GGTGCGTCGC GGGCTGGGCC GGGCTCGGCG TCGGCGAATG GTCGGCCGCG
GTCGCCTACT TCATCGGCTA CCTGTTCCTC GGGGCCGCGT TGCTCCAGGT CCTCACTCCC
CCGGGGAGCC GGAGACGCCT GGTGCGCGTC GACGCCCTCC TCGAGGCGGC GACCATCGTG
ACCGTGGCGG TACTGCTCGT GTGGACGGCG TCCACCACCG CAGCGTTCGA GGCCACCGGA
CTGAGTGTCG CCGAAGGCGC CCTCCAGGTC TCGACGCCGG TCGCGGACCT CACCCTGCTC
GCCTTCGCGG CCCGCGCCGT CGTCGTACGT CGTGGCCGCT CGGCGACCGG CTGGCTGCTC
ACGGGCGCCA CGGGCACGTG GCTGCTGACC AGCCTCGCGA TCGTGGCGGG CGGAGCCCCC
GACCGCCTGG ACACCGGCTG GCTGCTCGGC ATGCTGCTCC TCGCGGCCGC CGCCCTGCCG
CGCGATGCCG CCGCCGCGAG CATGGCTCGG GTCGGGCGGC CCGCCGTGCG GCGCCGGCAC
ACCGCGCGGA TGCTGCTCGC CATCCTCCCG GCCGCCGTGC CCCCCGTGGC TCACCTGGTC
ACCCACCACG ACCAGCGCGC CCTCTACGTC CCCTACCTCG GGATGGGCGT CCTGCTCCTG
ATCACCCTGC TCCGCGTCGG CCGGCTCCTG GCGTCCGAGG ACGCCGCCCA CGCCGAGCTG
GCGCGCAGCC ACGAGTACCT CCAGGCACTC GCGGACAACT CGGTCGACGC CATCCTCGTC
GTCGACGAGC GGCTCGACAT CGTGTTCTCG TCCAGCGGCG TCCAGGAGTA CCTCGGCCCG
TCGCCACGGC GCGGGCTGCC CGCCTGGGCC GAGGCCGCCG GGCTGCGGCT GCACGACGGG
CTCGAGGACG CGCTGGCGCG CACCGTGGCG GCACCCGACG CCATCGTGCA GGAGGAGTTC
CTGCTCGTGC CGGAGCACGA GAAGCCGCGC TGGATCCTCG CCCGGTTCGT CAATCTCCTC
CATGATCCCG CCGTCCGCGG GATCGTGATC TCGCTGTCGG ACTCGACCGA GCGCAAGGAG
ATGGAGCTGG AACTGGGCCG AGCGCGAGAC GCCGCGCTGG CCGGCTCGCG CGCGAAGTCG
ACCTTCCTCG CCACCATGAG CCACGAGATC CGGACGCCGC TGAACGGGGT CCTCGGGCTG
ACCGAGCTGA TGCTGACGAC CCGCCTGGAC GGCCAGCAGG GCCGGTACGC CGAGGGCATC
CGGGTGGCCG GCGAGGCGCT GCTCCAGGTC ATCAACGACA TCCTCGACTT CTCCAAGATC
GAGGCCGGCC GGCTGGAGCT GGAGGAGGTC GACCTCGACG TCGCCCGGTT GCTCGACGAG
ACCGCCCGGA TGGTCGCGGG CCCGGCCCAG GAGAAGGGGC TCGCGCTCGT CGTACGCTGC
TCGCCCGAGG TGCCGCCCGG GCTCCGTGGC GACGCGGTCC GCCTGCGCCA GGTACTGCTC
AACCTCACCT CGAACGCGAT CAAGTTCACC CGGACCGGCG AGGTCGTCCT CTCGGCGCAG
CTCGAGCGGG CACCGGTCGC GGACGTGGCG AGCGTGCGGT TCGAGGTCGC CGACACCGGC
ATCGGCATCG ACCCCGCCCA GCGGGAGCAC CTGTTCGATG CGTTCACCCA GGCGGACTCC
ACCACCACGC GGCGCTTCGG CGGCACCGGG CTGGGGCTGG CGATCAGCCG CCAGCTCGTC
ACCGCCATGG GCGGTGCGAT CGGCGTCGAG CCACGGTCAG GTCCCGGGAG CCGGTTCTGG
GTCGTCGTCC CGCTGCCCGT GCGCGCCGGC CAACCGCAGG CCCACCTGGC CCTGGCCGAC
GCCTGGCGGG GGCAGTCCGC ACTGGTCGTC GACGACAGCG AGAGCAGCCG CACGGCGCTG
GTCGAGCAGC TGACGCGTTG GGGAGTCGAG GTGGACCTGG CGTCTTCGGG CGACGAGGCA
CTGGTCCGGC TGCACCAGGC GGCGGCCGCG GGTGCGCCGT ACCGCCTCGC GCTCCTGGAC
CTGTCGATGC CCGGGATCAA CGGCCTCGAC CTCGCCGCCA TGATCGAGGA CGCCCCGGAG
CTGGCCGGTA CGGCGACCAT CCTGCTCACG TCGGACACGG ACGTGCTGCC GACCGCGTCG
CTCCCGGCGG GCCTGGCGGC CCGCCTCGTC AAGCCGGTGC GTCCGCACGC GCTGGTCGAG
GCGATCGCCG ACCTCCCGAA CGGCCCAAGC GGCACGCCGG CACCGGAGCC CGCCCCCGAG
CCACGAGGAG CCCGCCTCCT CGTCGTCGAG GACAGCGAGA TCAACCAACT CGTGGCGATC
GGCATCCTCG AGCACCTCGG CTACCAGGTC GAGGTCGCCG CCGACGGGCT CGCCGCCCTG
GAGGCGCTGC GCACGCAGTC CTTCGACGCG GTGCTCATGG ACTGCCTGAT GCCCGTGATG
GACGGCTACC AGGCGACCGC CGAGATCCGC CGCCTGGAGC TGGGCGGCCG CGGCCTGCCG
ATCATCGCGA TGACCGCCTC CGCGGTCGCG GGCGACCGCG AGCGCTGCCT GGCCGCCGGC
ATGGACGACT ACATCACCAA GCCGGTGACC AGTGGGTCGC TCGAGACCGT CCTCGCGCAC
TGGCTGCGCT CCCCCTCGAC GGCGGGCAGC GCCGAGGTGT CCGCCGAGGG CTGA
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| Protein sequence | MDAPDDRTTP RPAVAGVACA VVGVVGLHLV TPSGRTGDLT YLAGVLVAVA IAWVGVLRHP
AGRGVPLLVA TAVSVSVTGD VLERCVAGWA GLGVGEWSAA VAYFIGYLFL GAALLQVLTP
PGSRRRLVRV DALLEAATIV TVAVLLVWTA STTAAFEATG LSVAEGALQV STPVADLTLL
AFAARAVVVR RGRSATGWLL TGATGTWLLT SLAIVAGGAP DRLDTGWLLG MLLLAAAALP
RDAAAASMAR VGRPAVRRRH TARMLLAILP AAVPPVAHLV THHDQRALYV PYLGMGVLLL
ITLLRVGRLL ASEDAAHAEL ARSHEYLQAL ADNSVDAILV VDERLDIVFS SSGVQEYLGP
SPRRGLPAWA EAAGLRLHDG LEDALARTVA APDAIVQEEF LLVPEHEKPR WILARFVNLL
HDPAVRGIVI SLSDSTERKE MELELGRARD AALAGSRAKS TFLATMSHEI RTPLNGVLGL
TELMLTTRLD GQQGRYAEGI RVAGEALLQV INDILDFSKI EAGRLELEEV DLDVARLLDE
TARMVAGPAQ EKGLALVVRC SPEVPPGLRG DAVRLRQVLL NLTSNAIKFT RTGEVVLSAQ
LERAPVADVA SVRFEVADTG IGIDPAQREH LFDAFTQADS TTTRRFGGTG LGLAISRQLV
TAMGGAIGVE PRSGPGSRFW VVVPLPVRAG QPQAHLALAD AWRGQSALVV DDSESSRTAL
VEQLTRWGVE VDLASSGDEA LVRLHQAAAA GAPYRLALLD LSMPGINGLD LAAMIEDAPE
LAGTATILLT SDTDVLPTAS LPAGLAARLV KPVRPHALVE AIADLPNGPS GTPAPEPAPE
PRGARLLVVE DSEINQLVAI GILEHLGYQV EVAADGLAAL EALRTQSFDA VLMDCLMPVM
DGYQATAEIR RLELGGRGLP IIAMTASAVA GDRERCLAAG MDDYITKPVT SGSLETVLAH
WLRSPSTAGS AEVSAEG
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