Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1372 |
Symbol | |
ID | 4598539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1449936 |
End bp | 1450517 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639775970 |
Product | regulatory protein, TetR |
Protein accession | YP_922573 |
Protein GI | 119715608 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0306025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCACGA GCCCGCGCCG CCGCCAGCTC CTCGACGCCG CGCTCCACGT CATCGCCGAC GACGGGCTGC GCGGTCTCAC CCACCGAGCC GTGGACCGTC GTGCCGGACT TCCCGAGGGC AGCTGCTCCG CCTACTGGCG GACCCGCGCC GCGCTCCACG GCGCGCTCAC CGAGTACGTC GCGCAGAGTC TCCTCGGTGA CGTCGACGAG CTCGCGGAGC GGCTCCGGAC CGAGTGCGAG GGCGACGAGG AGAGCATCGA TGCCGCCCTG TCGCTGTTCC TGCACTGGCT CGATCAGCGC GAGCTGCTCG TCGCGCGCCT GGAGCTGAGC ATGGCGGCGA CCCGTGACTC CGGCCTGGCC GCGCTGCTCG CCGACCACCG GTCCCGACTG GTCACCCTGG TCGAGGGGAT CATGGCGACC TCGGGCAAGG GGTACGCCCG CGACCGCGCC GAGACCCTGG TGGCGTCGTA CGACGGCGTC CTGCTCGCGG CGCTGCTGCG ACCGCCCGCC AGCCGACGGG AGTTCCTGAC CCGCTCGCTC GAGCTCCTCG GCGAGCAGCT CGGGGGCGAG CCCGCGGCGT GA
|
Protein sequence | MSTSPRRRQL LDAALHVIAD DGLRGLTHRA VDRRAGLPEG SCSAYWRTRA ALHGALTEYV AQSLLGDVDE LAERLRTECE GDEESIDAAL SLFLHWLDQR ELLVARLELS MAATRDSGLA ALLADHRSRL VTLVEGIMAT SGKGYARDRA ETLVASYDGV LLAALLRPPA SRREFLTRSL ELLGEQLGGE PAA
|
| |