Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1287 |
Symbol | |
ID | 4598909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 1361432 |
End bp | 1362136 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639775881 |
Product | regulatory protein, TetR |
Protein accession | YP_922488 |
Protein GI | 119715523 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGT CCTCGGTCTC CAAGCTCGTG CCGCGGGTGC CCGGCGTCCC GGTGCCGGGC GGCAGCCGTC GCCAGCAGTA CTCCGCCTCC ACGAAGCGGG CGCTGGTCGA TGTCGCGGAG GAGCTGTTCA CCGAGAACGG GTACGCCGCG ACCTCGCTGG ACGCGATCGT CGCCGGGGCC CGGGTCACCA AGGGCGCGCT CTACCACCAC TACAGCGGCA AGCAGGCGCT GTTCGAGGCG GTCTTCGAGC GGGTCGAGCA GGACGCCGCC CGCGCGATCC AGAAGGCCCT CAAGGGCCAC CGCGACCCGT GGGAGAAGGC GCAGGCGGGG CTCCGCGCGT TCCTGGCCGT GGTGCAGGAG GCGCGATACC GCCGGATCGT GATCCAGGAG GGGCCCTCGG TCCTCGGCTA CGAGCGCTAC CGCGAGCAGG AGGAGCGCTC CACGTTCGCC AACGTGCTGG AGATCGTCCA GTCCGTGCTG GCCGCCGGCA AGTGGGACCT CGACGACGCG CTGCAGCAGA CCTTCGCGCG GATCTTCTTC GGCGCGATGT CCTCGGCCGG GGAGTCCGTG TCGAGCGCAC CCGACCCGAT CCAGGCAGCC GCGAACGTGG AGACCGCGAT CGGCTTCATC CTGGCCGGCT TCCAGGCCCT GGCCGAGAGC GGTGTCGAGC TGCCGTCCGG CGAGGTCGTC GAGACGACCT CCTGA
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Protein sequence | MSKSSVSKLV PRVPGVPVPG GSRRQQYSAS TKRALVDVAE ELFTENGYAA TSLDAIVAGA RVTKGALYHH YSGKQALFEA VFERVEQDAA RAIQKALKGH RDPWEKAQAG LRAFLAVVQE ARYRRIVIQE GPSVLGYERY REQEERSTFA NVLEIVQSVL AAGKWDLDDA LQQTFARIFF GAMSSAGESV SSAPDPIQAA ANVETAIGFI LAGFQALAES GVELPSGEVV ETTS
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