Gene Noca_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1287 
Symbol 
ID4598909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1361432 
End bp1362136 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID639775881 
Productregulatory protein, TetR 
Protein accessionYP_922488 
Protein GI119715523 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGT CCTCGGTCTC CAAGCTCGTG CCGCGGGTGC CCGGCGTCCC GGTGCCGGGC 
GGCAGCCGTC GCCAGCAGTA CTCCGCCTCC ACGAAGCGGG CGCTGGTCGA TGTCGCGGAG
GAGCTGTTCA CCGAGAACGG GTACGCCGCG ACCTCGCTGG ACGCGATCGT CGCCGGGGCC
CGGGTCACCA AGGGCGCGCT CTACCACCAC TACAGCGGCA AGCAGGCGCT GTTCGAGGCG
GTCTTCGAGC GGGTCGAGCA GGACGCCGCC CGCGCGATCC AGAAGGCCCT CAAGGGCCAC
CGCGACCCGT GGGAGAAGGC GCAGGCGGGG CTCCGCGCGT TCCTGGCCGT GGTGCAGGAG
GCGCGATACC GCCGGATCGT GATCCAGGAG GGGCCCTCGG TCCTCGGCTA CGAGCGCTAC
CGCGAGCAGG AGGAGCGCTC CACGTTCGCC AACGTGCTGG AGATCGTCCA GTCCGTGCTG
GCCGCCGGCA AGTGGGACCT CGACGACGCG CTGCAGCAGA CCTTCGCGCG GATCTTCTTC
GGCGCGATGT CCTCGGCCGG GGAGTCCGTG TCGAGCGCAC CCGACCCGAT CCAGGCAGCC
GCGAACGTGG AGACCGCGAT CGGCTTCATC CTGGCCGGCT TCCAGGCCCT GGCCGAGAGC
GGTGTCGAGC TGCCGTCCGG CGAGGTCGTC GAGACGACCT CCTGA
 
Protein sequence
MSKSSVSKLV PRVPGVPVPG GSRRQQYSAS TKRALVDVAE ELFTENGYAA TSLDAIVAGA 
RVTKGALYHH YSGKQALFEA VFERVEQDAA RAIQKALKGH RDPWEKAQAG LRAFLAVVQE
ARYRRIVIQE GPSVLGYERY REQEERSTFA NVLEIVQSVL AAGKWDLDDA LQQTFARIFF
GAMSSAGESV SSAPDPIQAA ANVETAIGFI LAGFQALAES GVELPSGEVV ETTS