Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_1186 |
Symbol | |
ID | 4599286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 1260194 |
End bp | 1261036 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639775780 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_922387 |
Protein GI | 119715422 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.218378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGTACG TGACCTACGA GTCTCCGGAA GGCCGCGGTC GCCGGGTCGG GTACCTCGAC GGCGACGCCG TGGTCGATGC CGGGTTCGAC GGCGACATGG TCGCGTTCAT CGAGGCCGGG GCACCGGTCG GGACCACCCG GGGTGTCGCG AACGCGGTGC TGCGGGCACC CTTGCGGCCA CGCACGCTGC GTGACTTCCT CGCCTTCGAG GGCCATCTAC TCAACGTCTT CCCGGCCCTC GGCAAGGCGA TACCGGAGGA GTGGTACCGG CTTCCGGCCT ACTACAAGGG ACTACCGGAC ACCGTGATCG GACCGGAGGA CGAGATCCCG TGGCCGGCGT ACACCCAGCG GCTCGACCAC GAGCTCGAGC TCGCCGCGGT CATCGGCCGT CCGGGGAAGG ACATCACCGA GGACAACGCC CTCGACCACG TCTTCGGCTA CACGATCTGG AACGACCTCT CCGCGCGTGA CGTCCAGGCG GGCGAGCTGC CGGTGGGGAT GGGTCCGGGC AAGGCGAAGG ACTGGGACGG CTCGAACGTC CTCGGCCCCT GCATCGTCAC CGCCGACGAG GTCGACCCGC ACGACATCGA GCTCGAGGTC CGCGTCAACG GCGAGCGTTG GGGCGGCGCC AACACCCGGG ACATGCACCA TACGTTCGAG TCGATGATCG TCTACGCATC CCAGGCGCTG ATGCTCCGAC CCGGCGAGGT GCTCGGCTCC GGCACGGCCA CCGGGGGCAG CGGCGTGGAG CTGGGTCGCT GGCTCGCCCC CGCCGACACG GTCGAGATGG AGGCCTCCGG CATCGGAGTA CTCCGCAACG TCGTCGGGCA CCGACCGGCC TGA
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Protein sequence | MRYVTYESPE GRGRRVGYLD GDAVVDAGFD GDMVAFIEAG APVGTTRGVA NAVLRAPLRP RTLRDFLAFE GHLLNVFPAL GKAIPEEWYR LPAYYKGLPD TVIGPEDEIP WPAYTQRLDH ELELAAVIGR PGKDITEDNA LDHVFGYTIW NDLSARDVQA GELPVGMGPG KAKDWDGSNV LGPCIVTADE VDPHDIELEV RVNGERWGGA NTRDMHHTFE SMIVYASQAL MLRPGEVLGS GTATGGSGVE LGRWLAPADT VEMEASGIGV LRNVVGHRPA
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