| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1131 |
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| Symbol | |
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| ID | 4599384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1199060 |
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| End bp | 1200211 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639775727 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_922334 |
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| Protein GI | 119715369 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGCA CCCTGGTCGG ACTGGACATC GGCAGCTCCG GTGTCCGCGC CGCCGAGTTC
GTCCCCGGAC GCCGCCGTCC CACGCTGCGG CGGTTCGCGC AGCTCCCGCT GCCGTCCGGC
GTGGTCCGGG CCGGCGTGGT CGCCGACGGT GAGGCGCTGA CCGAGGCGCT GAAGGAGCTC
TGGTCGAAGG GCAAGTTCGG CTCCCGCAAC GTCGCCCTCG GCGTCGCGAA CGCAGGTGTC
CTGGTGCGCC AGCTCGACCT CGACTGGATG CCGCCGGCGG ACTTCCGCAA GGCACTGCGC
TACCAGGTCC AGGACGTGCT GCCGTTCTCG GTCGACGAGG CGAACCTCGA CCACCACCTG
CTCGAGGAGC TCGACGTCGT CGGCGAGGAC GGTACGGCGC GCCGGGTCGC CCGGATCCTC
CTCGTCGCCG CCTCCCGGGA CATGGTCGAC GCCTTCGTCG ACTCCGCCCG CCGGGCCCGC
CTGCGGATCC AGACCGTCGA CCTGCTGCCG TTCGCGCTGC TGCGCGCCCG GACCCCGATG
GTGCAGGACG GGCCCGCGGT GACCGAGGCG ATCGTCGACG TCGGCTCCGA CGTGGTGTCG
GTCGTCGTGC ACACCGCGGG CGTCCCACGC TACGTCCGGA TGATCCCCGG CGTCGGCGGC
GACTCGATCA CGGCGGCCGT CCAGGAGCGG TACGACTGGA CCTGGGAGGA CGCCGAGCGG
ACCAAGGTGT ACGTCGGCCT CCCCGGCCAC GCGCACCTCG ACCCGAGCCA GGCCACCGCG
CTGAGCCCGC GCACCGACGG CCTCGACCAC GCGGCCCAGC AGGTCGTCGA CGCGGCCGCC
CGCGGCTTGG CCGAGGAGAT CAGCACGACC CTGGACTTCT ACCGCGACTC CGCCGCCGAC
CAGGCCGCGC AGGCCGAGCC CGCCGGGGAC GCCGAGGCCC GCACCGCGGG CCCCGTCGGC
CGGGTGCTGC TCACCGGCTC CGGCGCCGCG CTGGGCGGGT TCGCGGAACT GCTCGGCCAG
CGGCTCGCCG TACCCGTGGA CCGCCTCGAC GCGCTCGCCG GCGTCCGCGC CCCCGGCCGG
CTCCGGCTGG CCGACGCCGA CCTGCCGGCG CTGGCGGTGC CCGCCGGCCT CTGCGTGGGA
GCGGCCCGAT GA
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| Protein sequence | MSRTLVGLDI GSSGVRAAEF VPGRRRPTLR RFAQLPLPSG VVRAGVVADG EALTEALKEL
WSKGKFGSRN VALGVANAGV LVRQLDLDWM PPADFRKALR YQVQDVLPFS VDEANLDHHL
LEELDVVGED GTARRVARIL LVAASRDMVD AFVDSARRAR LRIQTVDLLP FALLRARTPM
VQDGPAVTEA IVDVGSDVVS VVVHTAGVPR YVRMIPGVGG DSITAAVQER YDWTWEDAER
TKVYVGLPGH AHLDPSQATA LSPRTDGLDH AAQQVVDAAA RGLAEEISTT LDFYRDSAAD
QAAQAEPAGD AEARTAGPVG RVLLTGSGAA LGGFAELLGQ RLAVPVDRLD ALAGVRAPGR
LRLADADLPA LAVPAGLCVG AAR
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