| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1127 |
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| Symbol | |
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| ID | 4599380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1194192 |
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| End bp | 1195427 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639775723 |
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| Product | type II secretion system protein |
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| Protein accession | YP_922330 |
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| Protein GI | 119715365 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.580874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGTAG CCGTGGCCAG CACGACGACG CAGTACGCCT ACAAGGTCCG CGACGCCCAG
GGCCGGTTCA CCGAGGGCAA GGTGGAGGCC GCCTCGGAGG CGGCTGTCGC CGACAAGCTG
CGCGCGATGG GCTACGTCCC GCTCCAGGTG CGGCCCGCCA ACGTCGGCAT GCAGCGCGAG
ATCAAGCTCG GCTTCAAGAA GCGGATCAAG CCGCGCGACC TCGCGGTCTT CGCCCGCCAG
TTCGCCACCA TGATCGACGC CGGCCTGACC ATGCTGCGGG CGCTCTCGAT CATGGCCGAG
CAGGTCGAGA ACCCCGAGCT GCGCAAGGTG CTGCGGGCGG TCAAGCAGGA CGTCGAGGCC
GGGCACAGCC TGTCGTCGGC CTTCGGCAAG TGGCCGCGCG TCTTCCCGCC GCTCATGATC
AGCATGGCCA AGGCCGGCGA GGCGGGCGGC TTCCTCGACA CCGCGATGCG CCAGATCGCC
GACAACTTCG AGGCCGAGGT CAAGCTGCGC AGCAAGATCA AGGCCGCGCT GACCTACCCG
ACCGTGGTGT TCTTCCTGGC GATCATCATG TGCATCGCGC TGCTGATCTT CGTGGTCCCG
GTCTTCGAGA AGATGTTCAA GGACCTCGGC GGCGAGCTGC CGCTGCCGAC CAAGATCCTG
GTGATGCTCT CGGCGGCGAT GAAGTACGTC GTACCCCTCG GCGCGGTGCT CACCGGTGCC
CTCGTCTGGT GGTGGCGCCG CTACGGCCGC ACCGAGCGGG TCCGCAACGT CGTCGACCCG
CTCAAGCTCA AGCTGCCGGT CTTCGGCAAC CTGTTCCGCA AGCTCGCTCT GGCCCGGTTC
GCCCGCAACT TCAGCACCCT GCTCTCGGCC GGCGTCCCGA TCCTCCAGGC GCTCGACATC
GTCTCCGACA CGACCGGCTC GGTGGTGATC GGCCGCGCCC TGGCCGAGGT CAAGGAGTCG
GTGCGCCAGG GCGAGTCGGT GGCGGGTCCG CTGAGCCACC ACGACGTGTT CCCGCCGATG
GTCGTGCAGA TGATCGCCTC CGGCGAGGAG TCCGGCGCCA TCGACGCGAT GCTCGCGAAG
ATCGCCGAGT TCTACGACGC CGAGGTCGAG TCGATGACCG AGGGCCTGAC CGCCCTGATC
GAGCCGCTGA TGATCGCGTT CCTCGGCGGC CTCGTCGGGT CGATGATCGT CGCGCTGTAC
ATGCCGATGT TCAAGATCTA CGACATGATC GGATGA
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| Protein sequence | MAVAVASTTT QYAYKVRDAQ GRFTEGKVEA ASEAAVADKL RAMGYVPLQV RPANVGMQRE
IKLGFKKRIK PRDLAVFARQ FATMIDAGLT MLRALSIMAE QVENPELRKV LRAVKQDVEA
GHSLSSAFGK WPRVFPPLMI SMAKAGEAGG FLDTAMRQIA DNFEAEVKLR SKIKAALTYP
TVVFFLAIIM CIALLIFVVP VFEKMFKDLG GELPLPTKIL VMLSAAMKYV VPLGAVLTGA
LVWWWRRYGR TERVRNVVDP LKLKLPVFGN LFRKLALARF ARNFSTLLSA GVPILQALDI
VSDTTGSVVI GRALAEVKES VRQGESVAGP LSHHDVFPPM VVQMIASGEE SGAIDAMLAK
IAEFYDAEVE SMTEGLTALI EPLMIAFLGG LVGSMIVALY MPMFKIYDMI G
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