Gene Noca_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1021 
Symbol 
ID4599682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1072579 
End bp1073475 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content72% 
IMG OID639775620 
ProductABC transporter related 
Protein accessionYP_922227 
Protein GI119715262 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCA TCGAATCCCT GTCGAAGAAG TACGGCGGCC GCGCCGTCGT CGACGACATC 
ACCTTCACGG CCCGACCGGG CCGCGTCACC GGGTTCCTCG GCCCGAACGG CGCCGGCAAG
TCGACCTCGA TGCGCATGAT GGTCGGCCTC ACCCGGCCGA CGTCCGGAGC CGCCGCCATC
TCGGGTCGCC GGTTCACGGA CCTGCCCAAC CCCGGCCGCG AGGTCGGCGT GATGCTCGAC
GCCTCGGCGC AGCACGCCGG TCGCACCGGC CGGGAGATCC TCACCCTGGC CCAGCAGCTG
ATGGGCCTGC CGGACGACCG CGTCCGGCAG ATGCTCGACC TCGTCAGCCT CACCGAGGCG
GAGTCGGAGC GGCGTGTCGG CAGCTATTCG CTCGGCATGC GCCAGCGTCT CGGCATCGCC
GTCGCCCTGA TCGGCGGGCC GTCCGTCCTG ATCCTCGACG AGCCGGCGAA CGGTCTCGAC
CCGGCCGGGA TCCGCTGGAT GCGCGACCTG CTCCGGTGGT ACGCCGACGG GGGCGGAACG
GTCCTCCTCT CGTCGCACCT GCTGCACGAG GTCGAGGTCA TCGCCGACGA CATCGTGATG
ATCGGGCGCG GTCGCATCGT GGCCCAGGGC GCCAAGACGG AGCTGCTCGA AGGCGCCGGG
ACGATCGTCC GCTCGCGGGA CATGGCCGCG CTCGAGCGCC TGCTGCGCGA GTCGGGCCTC
GTCACGACAC CCGGGCGGGA CGGTGCGCTC CGCGCCGACG CCGACCTCGC CGTCGTCGGG
CTGCTCGCCC GCGACGCCGG CCTCGCCCTC ACCGAGCTGC GCACCGCCGA CGGCGGCCTC
GAGGAGCTCT TCCTCCAGCT CACCGCCGAC ACCCAACGAG AAGGGAACGC AGCATGA
 
Protein sequence
MITIESLSKK YGGRAVVDDI TFTARPGRVT GFLGPNGAGK STSMRMMVGL TRPTSGAAAI 
SGRRFTDLPN PGREVGVMLD ASAQHAGRTG REILTLAQQL MGLPDDRVRQ MLDLVSLTEA
ESERRVGSYS LGMRQRLGIA VALIGGPSVL ILDEPANGLD PAGIRWMRDL LRWYADGGGT
VLLSSHLLHE VEVIADDIVM IGRGRIVAQG AKTELLEGAG TIVRSRDMAA LERLLRESGL
VTTPGRDGAL RADADLAVVG LLARDAGLAL TELRTADGGL EELFLQLTAD TQREGNAA