| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0939 |
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| Symbol | |
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| ID | 4597472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 985091 |
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| End bp | 986479 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639775542 |
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| Product | cystathionine beta-synthase |
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| Protein accession | YP_922149 |
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| Protein GI | 119715184 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG0031] Cysteine synthase
[COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
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| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.44231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTCAC TCCTCGACCT GATCGGCAAC ACCCCGCTGC TGAGGCTCTC GACGTCCATG
GGCTCCCTGA ACGGCGCGAA GGGACCGATC GTCCTCGCCA AGGTGGAGTA CCTCAACCCC
GGCGGCTCCG TGAAGGACCG CATCGCCACC CGGATGATCG AGGCGGCCGA GGCGTCCGGG
GAGCTTCAGC CCGGCGGCAC CATCGTCGAG CCGACGTCCG GCAACACCGG CGTCGGGCTG
GCGATGGTCG CCCAGGCGAA GGGCTACAGG TGCGTCTTCG TCTGCCCGGA CAAGGTCAGC
GAGGACAAGC GCAACGTGCT GAAGGCGTAC GGCGCGGAGG TGGTCGTCTG CCCGACCGCG
GTCGAGCCGG AGCACCCCGA CTCCTACTAC AACGTCTCCG ACCGGCTCGC CTCGCAGCCG
GGTGCCTGGA AGCCGGACCA GTACTCCAAC CCGCACAACC CGCGGTCGCA CTACGAGACG
ACCGGCCCGG AGATCTGGGC GCAGACCGAG GGGCGGGTCA CCCACTTCGT CGCCGGCGTC
GGCACCGGCG GCACCATCAG CGGCACCGGG CGCTACCTCA AGGAGCAGAA CTCCTCGGTC
CAGGTCATCG GGGCCGACCC GGCGGGCTCG GTCTACTCCG GCGGCACCGG CCGGCCCTAC
CTCGTCGAGG GAGTGGGCGA GGACTTCTGG CCGGAGGCCT ACGATCGCGA CGTCGCCGAC
CGGATCATCG AGGTCTCCGA CGCCGACTCG TTCGCGATGA CGCGGCGGCT GGCCCGCGAG
GAGGCCCTGC TGGTCGGCGG TTCCTCCGGC ATGGCCGTGC ACGCGGCGGT CCAGCTCGCC
CACGAGCTCG CCGGCACCCC CGAGGGCGAG GACGCGGTGA TCGTCGTACT CCTCCCGGAC
TCCGGCCGCG GCTACCTCAC GAAGGTCTTC AACGACGACT GGCTCGCGCA GTACGGATTC
CCGGTCGACG GCGCCGAGCG CTCCGTGCAG TCCGTCGGGG AGGTGCTCCG CGGCAAGAGC
GGGCGGCTGC CCGACCTCGT GCACACCCAC CCGAACGAGA CCATCGCCGA AGCCGTCGCG
ATCCTCCAGG AGTACAACGT CTCCCAGATG CCGGTCGTGC GCGCGGAGCC TCCGGTGGTG
GCCGCCGAGG TCGTCGGATC GGTCTCCGAG CGGACCCTGC TCGACCTGCT GTTCACCGGC
TCGGCCAAGC TCACCGACAG CGTCGGCGAG CACATGGCGC CCCCGCTGCC GACGATCGGC
TCCACCGAGC CCGCCTCCGA GGCCGTCGCC GCACTCGAGG GCGCCGACGC CCTGTTGGTG
CACGAGGACG GCAAGCCCGT CGGCGTCGTC ACCCGCCACG ACCTGCTGGC CTACCTCGCG
CGCGGCTGA
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| Protein sequence | MNSLLDLIGN TPLLRLSTSM GSLNGAKGPI VLAKVEYLNP GGSVKDRIAT RMIEAAEASG
ELQPGGTIVE PTSGNTGVGL AMVAQAKGYR CVFVCPDKVS EDKRNVLKAY GAEVVVCPTA
VEPEHPDSYY NVSDRLASQP GAWKPDQYSN PHNPRSHYET TGPEIWAQTE GRVTHFVAGV
GTGGTISGTG RYLKEQNSSV QVIGADPAGS VYSGGTGRPY LVEGVGEDFW PEAYDRDVAD
RIIEVSDADS FAMTRRLARE EALLVGGSSG MAVHAAVQLA HELAGTPEGE DAVIVVLLPD
SGRGYLTKVF NDDWLAQYGF PVDGAERSVQ SVGEVLRGKS GRLPDLVHTH PNETIAEAVA
ILQEYNVSQM PVVRAEPPVV AAEVVGSVSE RTLLDLLFTG SAKLTDSVGE HMAPPLPTIG
STEPASEAVA ALEGADALLV HEDGKPVGVV TRHDLLAYLA RG
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