| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0723 |
|---|
| Symbol | |
|---|
| ID | 4599827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 769096 |
|---|
| End bp | 770184 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639775324 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_921935 |
|---|
| Protein GI | 119714970 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2730] Endoglucanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCG GCGTCCCCGC GAACACCGGG GCCGCACATC CCGTGGTCGA CGGCAACCGG
ATCATCGACG CCCGCAGCGG TCGCGACTTC GTGCCGCGTG GGGTCAACTG GAGCAGCTTC
GAGTACGCCT GCGCCCAGGG CTGGGGCATG TCGGCGCTCG ACAACCTGGT CGCCCGGGAC
CCGGCCACGA CGGAGGCGAA GGAGATCGCC GGCTGGGGTG CGAACACGGT CCGGCTCCCC
CTCAACCAGG ACTGTTGGCT CGGCACCCGC GGAGCACCGG TCAGCGACCA GTACGAGGAA
CGCTCGGTGG CCGGCTACCG CAGCGACGTG CACGCGTTCG TGACCGCGCT CAACCGGGCC
GGCATCGTGG TCGTGCTGGA CCTGCACAGC CGCAAGCGGA TCGGGCAGCC GGAGTTCGGC
AACCTGGCGA TGCCGGACTC CGAGTCGATC GCGTTCTGGA CCTCGGTCGC CACCGAGTAC
GCCGACAACC CGTCGGTGCT GTTCGACGCC TTCAACGAGC CCTACTCCCG GTACAGCTCC
AGCGGTGCCC GGCTGTTGTT CGGGCTCACC TGGCGGTGCT GGCGGGACGG CGGTTGCCAG
GCGCCGGTCG AGGATGACCA GACCGCGACC CTCGGACAGG TCACCTATCC CGTCCAGGGC
ATGGCCGCCG TGGTCAACGC CATCCGGGAC GCCGGTGCCG AGCAGCCGAT CCTGCTCGGC
GGCCTGGACT ACGCCAACGA CATCAGCCAC TGGCTGGAGT TCGCGCCGGA CGACGACCAG
CTGGTGGCGG CGTTCCACTC CTACGACTTC AAGGCGTGCG GCGACCCGGA CTGCTGGAAC
GACGTCATCG CCCCGGTCGC CGAGACCGTG CCCGTGCTGA CCTCCGAGCT CGGGGCCCGC
CATCCCGAGA ACGGGTACGT CGGGCGCTAC CTCGACTGGG CCGACGAGCA CAACCTGGGT
GTGCTGTTCT GGGTCTGGGC GGACCATCCC GGCGACCCGA TGGCACTGGT CACCGACGAG
CGCGGTCGGC CGACGGCGTA CGGCCGGGCT GCGCGCACCT GGCTGACCGG GCACCTGCCG
GCACGGTGA
|
|---|
| Protein sequence | MAAGVPANTG AAHPVVDGNR IIDARSGRDF VPRGVNWSSF EYACAQGWGM SALDNLVARD
PATTEAKEIA GWGANTVRLP LNQDCWLGTR GAPVSDQYEE RSVAGYRSDV HAFVTALNRA
GIVVVLDLHS RKRIGQPEFG NLAMPDSESI AFWTSVATEY ADNPSVLFDA FNEPYSRYSS
SGARLLFGLT WRCWRDGGCQ APVEDDQTAT LGQVTYPVQG MAAVVNAIRD AGAEQPILLG
GLDYANDISH WLEFAPDDDQ LVAAFHSYDF KACGDPDCWN DVIAPVAETV PVLTSELGAR
HPENGYVGRY LDWADEHNLG VLFWVWADHP GDPMALVTDE RGRPTAYGRA ARTWLTGHLP
AR
|
|---|
| |