Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0712 |
Symbol | |
ID | 4599816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 753385 |
End bp | 757257 |
Gene Length | 3873 bp |
Protein Length | 1290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639775313 |
Product | DNA-directed RNA polymerase subunit beta' |
Protein accession | YP_921924 |
Protein GI | 119714959 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGACG TGAACTTCTT CGACCAGCTT CAGATCGGCC TGGCCACCGC GGACGACATC CGCACTTGGA GCCACGGTGA GGTCAAGAAG CCGGAGACCA TCAACTACCG CACGCTCAAG CCCGAGCGTG ACGGCCTCTT CTGCGAGAAG ATCTTCGGTC CCACCCGGGA CTGGGAGTGC TACTGCGGCA AGTACAAGCG GGTCCGGTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC GAGGTGACCC GGTCCAAGGT CCGCCGCGAG CGGATGGGCC ACATCGAGCT CGCCGCCCCG GTCACCCACA TCTGGTACTT CAAGGGTGTC CCGAGCCGCC TGGGCTACCT GCTCGACCTC GCCCCGAAGG ACCTGGAGAA GGTCATCTAC TTCGCGGCGT ACATGATCAC GGCCGTCGAC GAGGACGCCC GCCACCGCGA CCTGTCCTCG CTCGAGGGCA AGGTCGGACT CGAGCGCGAG CGCCTCGAGA AGCGCCGCGA CCAGTCCATC GACGACCGTG CGAAGAAGCT GGAGGAGGAC CTGGCTGCCC TCGAGGCCGA GGGTGCCAAG GCCGACCAGC GGCGCAAGGT CAAGGACGGC GCCGAGCGCG AGATGAAGCA GCTGCGCGAC CGTGCCCAGC GGGAGATCGA CCGCCTCGAC GAGGTGTGGA ACACCTTCAA GTCGCTGAAG GTCCAAGACC TCATGGGCGA CGAGATGCTC TACCGCGAGA TGAAGAACTG GTTCGGCAAG TACTTCGAGG GCCACATGGG CGCCACGGCG ATCCAGAAGC GCCTGGAGAG CTTCGACATC GAGGCCGAGG TCGAGCTGCT GCGCGACACC ATCGCCAACG GCAAGGGCCA GCGCAAGGTG CGGGCCCTCA AGCGGCTCAA GGTCGTCGAC GCGTTCCGCA AGACCGGCAA CAAGCCGCAG GGCATGGTGC TCGACGCGGT CCCGGTCATC CCGCCGGACC TGCGGCCGAT GGTCCAGCTC GACGGCGGCC GCTTCGCGAC CTCGGACCTG AACGACCTGT ACCGCCGTGT CATCAACCGG AACAACCGGC TCAAGCGACT GCTCGACCTG GGTGCTCCCG AGATCATCGT CAACAACGAG AAGCGGATGC TCCAGGAGGC CGTCGACTCG CTGTTCGACA ACGGTCGCCG CGGTCGTCCC GTCACCGGCC CGGGCAACCG GCCGCTGAAG TCGTTGTCCG ACATGCTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTCGGCAAG CGCGTCGACT ACTCCGGCCG TTCCGTGATC GTGTCCGGCC CGCAGCTGAA GCTGCACCAG TGCGGCCTGC CCAAGCAGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTG GTCGACCTGT CGCACGCGCA GAACATCAAG TCCGCGAAGC GGATGGTGGA GCGCGCCCGC CCGGTCGTGT GGGACGTCCT CGAAGAGGTC ATCACCGAGC ACCCGGTGCT GCTCAACCGG GCACCCACCC TGCACCGTCT CGGCATCCAG GCCTTCGAGC CGCAGCTGAT CGAGGGCAAG GCCATCCAGA TCCACCCGCT GGTCTGCTCG GCGTTCAACG CGGACTTCGA CGGTGACCAG ATGGCGGTGC ACCTGCCGCT GTCCGCGGAG GCCCAGGCCG AGGCCCGGAT CCTGATGCTG TCGACGAACA ACATCCTCAA GCCGTCGGAC GGCCGCCCCG TGACCATGCC CACCCAGGAC ATGATCATCG GCCTGTTCTT CCTCACCACC GACCGTGACG GTCAGCCGGG TGACGGCCGG GCGTTCGCGT CGCCGGCCGA GGCGATCATG GCGTTCGACC GGGGTGAGAT CTCGCTGCAG AGCAAGGTCA GGATCCGGTT CACCGACATC GTGCCGCCGC TCGAGCTGGG CGCCGACTGG GAGCAGGGTC AGGCCGTCTC GCTGGAGACC ACTCTCGGCC GCGCGCTGTT CAACGAGACC CTGCCCGCCG ACTACCCGTA CGTGAACTAC GAGGTCGGCA AGAAGGCGCT CGGCGCGATC GTCAACGACC TGGCCGAGCG CTACACCAAG GTCGAGGTCG CGGCCTCCCT CGACGCGCTG AAGGACACCG GCTTCCACTG GGCGACCCGC TCCGGCGTCA CGGTCTCGAT CGACGACGTG ACGACCCCGG GTGACAAGGC CGACATCCTG TCGGGGTACG AGGCCCAGGC CGCCAAGGTC CAGAAGCAGT TCGAGCGCGG CCTGGTCACC GACGAGGAGC GCCGCCAGGA GCTCATCGAG ATCTGGACCC AGGCCTCCAA CGAGGTCGGC AAGGCGATGG AGGCGAACTT CGACCGCGCC AACCCGATCT ACATGATGGT CGACTCGGGT GCCTCCGGGA ACATGAACCA GATCCGGCAG GTCGCCGCGA TGCGTGGTCT CGTGGCGAAC CCGAAGGGCG AGATCATCCC GCGGCCGATC AAGTCGAACT TCCGCGAGGG CCTGACCGTC CTGGAGTACT TCATCGCGAC CCACGGTGCC CGCAAGGGTC TGGCCGACAC CGCGCTGCGG ACGGCCGACT CGGGCTACCT GACCCGTCGT CTGGTGGACG TCTCCCAGGA CGTGATCATC CGCGAGGACG ACTGCGGCAC CGAGCGCGGC CTGCCCAAGC GGATCGGCGA GCGCCGTGAG GACGGGACCG TGGTCAAGGC GGAGAACGCC GAGACCGCGG CGTACGCCCG CACGTCGGCC GTCGACGTCG CGCACCCGGA GACCGGCGAG GTGCTCGTCC GGGCCGGCGA GGACCTCGGC GACGTGAAGA TCGGCGAGCT GATCTCCGCG GGCGTCGAGG AGGTCAAGGT CCGCTCCGTG CTGACCTGTG ACGCCAAGAC CGGCACCTGC GCGAAGTGCT ACGGCCGGTC GCTGGCGACC GGCAAGCTCG TCGACATCGG TGAGGCCGTC GGCATCATCG CGGCCCAGTC GATCGGCGAG CCCGGCACCC AGCTGACGAT GCGTACCTTC CACACCGGTG GTGTGGCCTC GGCCGACGAC ATCACGCAGG GTCTGCCCCG TGTGGTCGAG CTCTTCGAGG CCCGCTCGCC CAAGGGACGC TCGCCGATCT CCGAGGCCGC CGGCCGGGTG ACGATCGAGG AGAGCGACAA GGCGCGCAAG GTGCTGATCA CCCCCGACGA CGGCTCCGAG GTCCAGGAGT ACCCGGTCTC GAAGCGGTCC CGCCTCCTGG TGGGGGACGG TGACCACATC GAGGTCGGCC AGATGCTCAC CGTCGGCACG CCCGACCCGC AGGACGTCCT GCGGATCCTG GGGGTGCGGC GGGCGCAGGA GCACCTGGTG GACGAGGTCC AGGCCGTGTA CCGCTCGCAG GGTGTGTCGA TCCACGACAA GCACATCGAG ATCATCGTGC GGCAGATGCT GCGCCGGATC ACGGTGATCG AGTCCGGCGA CACCAACCTG CTCCCGTCCG ACCTGGTCGA CCGGGTGCGG TTCGAGGAGG AGAACCGGCG CGTGGTCTCC GAGGGCGGCA AGCCGGCCTC GGGCCGTCCG GTCCTGATGG GCATCACCAA GGCCTCGCTG GCGACGGAGT CGTGGCTCTC GGCGGCCTCC TTCCAGGAGA CCACCCGGGT GCTCACCGAC GCCGCCATCC ACGGGCGCAG CGACTCGCTG CGCGGCCTGA AGGAGAACGT GATCATCGGC AAGCTGATCC CGGCGGGCAC CGGCCTCGAG CGGTACCGCA ACATCCGGGT GGAGCCCACC GAGGAGGCCC GCGCCGCGGC GTACTCCGTC ACCGGCTACG ACTCCTACGA CTACGAGTTC GGCAACGGGA CCGGCCAGGC CGTCGCCCTG GACGACTTCG ACTTTGGGTC CTATCAGAAT TAG
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Protein sequence | MLDVNFFDQL QIGLATADDI RTWSHGEVKK PETINYRTLK PERDGLFCEK IFGPTRDWEC YCGKYKRVRF KGIICERCGV EVTRSKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL APKDLEKVIY FAAYMITAVD EDARHRDLSS LEGKVGLERE RLEKRRDQSI DDRAKKLEED LAALEAEGAK ADQRRKVKDG AEREMKQLRD RAQREIDRLD EVWNTFKSLK VQDLMGDEML YREMKNWFGK YFEGHMGATA IQKRLESFDI EAEVELLRDT IANGKGQRKV RALKRLKVVD AFRKTGNKPQ GMVLDAVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL GAPEIIVNNE KRMLQEAVDS LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK RVDYSGRSVI VSGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLSHAQNIK SAKRMVERAR PVVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLIEGK AIQIHPLVCS AFNADFDGDQ MAVHLPLSAE AQAEARILML STNNILKPSD GRPVTMPTQD MIIGLFFLTT DRDGQPGDGR AFASPAEAIM AFDRGEISLQ SKVRIRFTDI VPPLELGADW EQGQAVSLET TLGRALFNET LPADYPYVNY EVGKKALGAI VNDLAERYTK VEVAASLDAL KDTGFHWATR SGVTVSIDDV TTPGDKADIL SGYEAQAAKV QKQFERGLVT DEERRQELIE IWTQASNEVG KAMEANFDRA NPIYMMVDSG ASGNMNQIRQ VAAMRGLVAN PKGEIIPRPI KSNFREGLTV LEYFIATHGA RKGLADTALR TADSGYLTRR LVDVSQDVII REDDCGTERG LPKRIGERRE DGTVVKAENA ETAAYARTSA VDVAHPETGE VLVRAGEDLG DVKIGELISA GVEEVKVRSV LTCDAKTGTC AKCYGRSLAT GKLVDIGEAV GIIAAQSIGE PGTQLTMRTF HTGGVASADD ITQGLPRVVE LFEARSPKGR SPISEAAGRV TIEESDKARK VLITPDDGSE VQEYPVSKRS RLLVGDGDHI EVGQMLTVGT PDPQDVLRIL GVRRAQEHLV DEVQAVYRSQ GVSIHDKHIE IIVRQMLRRI TVIESGDTNL LPSDLVDRVR FEEENRRVVS EGGKPASGRP VLMGITKASL ATESWLSAAS FQETTRVLTD AAIHGRSDSL RGLKENVIIG KLIPAGTGLE RYRNIRVEPT EEARAAAYSV TGYDSYDYEF GNGTGQAVAL DDFDFGSYQN
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