Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0565 |
Symbol | |
ID | 4596233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 595341 |
End bp | 596720 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639775180 |
Product | phage integrase family protein |
Protein accession | YP_921794 |
Protein GI | 119714829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGACCA GCTTCGACGT ACGGATCTAC GCGGTGCTCC CCTACCGGGG AGCCCGGGGT ACCACCTATG CAGTCAGGTG GCAGGTGCAG GGTCGCCGGT TCCGGCGCAC CTTCACGACC CGGAAGCTGG CGGACGCGTT CCGCGCCCAG CTCAAGGTCG CTGCCCAGGC CGGCCAGTCC TTCGTTGTCG ACAACGGCCT GCCGCTCTCA ATGCAGGAGC AGGCGCCGGA GCGCACCTGG ATGCAACACG CGATGGCCTA CGTCGACGTC AAGTGGGCCC ACGCCTCGGC CCGCCACCGT CGTGGGATCG CCGAGGCGCT GACGGACGTC ACGATCGCGA CGATGCCGGA GGCAGGTGGA CGTCCGCCGG TGGCTCGGAT GCGCCGCGTG CTGTTCCGGT GGGCCTTCAA CACCGCCGCA CGCTCGACCA GTCTGGATGA CGAGCATGCC GCCGCGCTCG CTTGGCTCAC GCGGCACTCG CCGCCACTGG TGGCCTTCAG CAGCTCCGCG ACCCTGCGTC AGGCACTGGA CCGGATCGCC CTACGCCAGG ACGGACGCCC GGCCGCGGCT TCTACCGTCA CCCGCAAGCG CGCCACTTTG CACAACGTCT TGGAGTACGC CGTCGAGGTT GAAGCGTTCC CCAGCAACCC GCTGCATCGG GTGCGGTGGC GACCGCCGCG CACCACCGAG GTCGTCGACC GGCGAGTCGT GGTCAACCCG ACCCAGGCAC GGGCCTTGCT CGATGCCGTC CAGACTGCCT CCCCAGCGCT CACCGCCTAC TTCGCCAGCC TGTACTACGC CGGTCTCCGA CCGGGCGAGG CCATCGAGTT GCGCCGGGAG GATCTGCAAC TCCCCATGTC GGGGTGGGGG CAGATCCTGC TGTCCCGCTC TCATCAGCGC GCCGGGGCCG CCTGGACCGA CACCGCCACC GCCGGCGAGG TACGGGGACT CAAGCACCGC GGCCGCGAGG ACACCCGACC GGTCCCGGCT CACCCGGACC TGGTCGCCAC GCTGACGCGA CATCTCGAGA CGTTCCCGAC CGGCGCTCAA GGCCACCTCT TCGCCGCCCG CACTGGGCGC GCCGGCACGC CCCTCTCACC GCCCTACCAC TCGCTGGTCA GCGCGAAGAC CATCTACCGG GTCTGGGCAG CGGCCCGACG CAACGCACTC ACCCGGCAGC AGGCCGACTC CGTGCTCGCC CGCCGACCCT ACGACCTGCG CCACGCCTGC CTGTCCACCT GGCTCAACGC CGGGGTGCCA CCGGCCCGCG TCGCCGAATG GGCCGGCCAC AGCGTCGACG TCCTCCTCCG GATCTACGCC AACTGCGTCG AGGGTGACGA CAAGATCGCC CTCACCCGGA TCAGCGAGGA GCTCCAGTAG
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Protein sequence | METSFDVRIY AVLPYRGARG TTYAVRWQVQ GRRFRRTFTT RKLADAFRAQ LKVAAQAGQS FVVDNGLPLS MQEQAPERTW MQHAMAYVDV KWAHASARHR RGIAEALTDV TIATMPEAGG RPPVARMRRV LFRWAFNTAA RSTSLDDEHA AALAWLTRHS PPLVAFSSSA TLRQALDRIA LRQDGRPAAA STVTRKRATL HNVLEYAVEV EAFPSNPLHR VRWRPPRTTE VVDRRVVVNP TQARALLDAV QTASPALTAY FASLYYAGLR PGEAIELRRE DLQLPMSGWG QILLSRSHQR AGAAWTDTAT AGEVRGLKHR GREDTRPVPA HPDLVATLTR HLETFPTGAQ GHLFAARTGR AGTPLSPPYH SLVSAKTIYR VWAAARRNAL TRQQADSVLA RRPYDLRHAC LSTWLNAGVP PARVAEWAGH SVDVLLRIYA NCVEGDDKIA LTRISEELQ
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