Gene Noca_0444 details

Gene Information

• Locus tag: Noca_0444
• ID: 4597343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 475120
• End bp: 477165
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639775058
• Product: Mername-AA223 peptidase
• Protein accession: YP_921673
• Protein GI: 119714708
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCGCA TATTCAAGGG TCCCTGGCTG TGGATCGTCC TCGCCGTGGT CGGCGTCCTG 
CTCGCCCTGC AGTACCTCGC GCCCAACCGC GGGGGCGAAG AGGTGGACGC CTCGAAGATG 
CAGGACCTCA TCAGCTCCGG TGAGATCAAG GAGCTGACCT TCGTCGACGG CGGCGAGCAG 
CAGATCAAGG CCACCCTCGA CAACGGCGAC AAGGTCACCG CCTTCTGGCT CGACGGGACC 
CAGGCGGAGC TGGACTCCCA GGTCCAGGAC CAGGTCGATG CGGGCAAGAT CGACTCCTAC 
ACGGTCGAGG TGCCCAAGCC GAGCCTGCTC GGCTCGATCC TGGCGACGCT GCTGCCGTTC 
GCGCTGATCA TCCTGCTCTT CCTGTTCCTC ATGAACCAGG TCCAGGGCGG CGGCGGTCGC 
GGCGTCATGC AGTTCGCGAA GTCGCGCGCG AAGCTGATCT CCAAGGACAT GCCGAAGACC 
ACGTTCGGCG ACGTCGCCGG TTGCGAGGAG GCGATCGAGG AGCTCGGGGA GATCAAGGAG 
TTCCTCCAGG AGCCCGCCAA GTTCCAGGCG GTCGGCGCCA AGATCCCCAA GGGCGTGCTG 
CTCTACGGCC CGCCCGGCAC CGGCAAGACC CTGCTGGCCC GGGCGGTCGC CGGTGAGGCG 
GGCGTCCCGT TCTACTCGAT CTCCGGGTCC GACTTCGTCG AGATGTTCGT CGGCGTCGGC 
GCCTCCCGGG TCCGTGACCT GTTCGAGCAG GCCAAGGAGA ACGCGCCCGC GATCGTGTTC 
ATCGACGAGA TCGACGCCGT CGGTCGCCAC CGCGGCGCCG GGATGGGCGG TGGCCACGAC 
GAGCGCGAGC AGACCTTGAA CCAGCTGCTG GTCGAGATGG ACGGCTTCGA CGTCCGCGGC 
GGCGTGATCC TGATCGCCGC CACCAACCGG CCCGACGTCT TGGACCCGGC GCTGCTGCGC 
CCCGGTCGCT TCGACCGCCA GATCCAGGTC GACGCCCCGG ACCTCAACGG CCGGCACATG 
ATCCTCAAGG TCCACTCGCG CGGGAAGCCG ATGTCCCAGG ACATCGACCT GCTCTCCGTG 
GCCCGTCGGA CACCCGGCTT CACCGGTGCC GACCTGGCCA ACGTGCTCAA CGAGGCGGCG 
CTGCTGACCG CGCGCAGCAA CCAGAAGCTG ATCACCAACG CCAACCTCGA CGAGGCCATC 
GACCGGGTGA TCGCGGGCCC GCAACGGCGT ACCCGCCTGA TGAGCGAGAA GGAGAAGCTG 
ATCACGGCCT ACCACGAGGG CGGCCACGCC CTGGTGGCTG CGGCGCTGCC CGGCACCGAC 
CCGGTGCACA AGATCACGAT CCTGCCCCGC GGCCGGGCCC TCGGCTACAC GATGGTGCTG 
CCCGACGAGG ACAAGTACTC CCAGACCCGG TCGCAGATGC TCGACTCGCT GGCCTACATG 
CTCGGCGGCC GTGCGGCCGA GGAGATGGTG TTCCACGACC CCACCACCGG TGCCGGCAAC 
GACATCGAGA AGGCCACCAA CCTGGCCCGC GCGATGGTCA CCCAGTACGG CATGACCGAG 
CGGCTCGGCG CGATCAAGCT GGGGGAGTCG AACTCCGAGC CGTTCTTGGG ACGCGACCTG 
GGCCACGCCC GCAACTACTC CGAGGACGTC GCCGCGATCG TCGACGAGGA GACCAAGAAG 
CTGCTCGCGA ACGCCCACCA GGAGGCCTTC GAGATCCTCG AGGAGAACCG CGACGTCCTC 
GACGCGCTGG TGCTCGAGCT AGTCGAGAAG GAGACGCTGG ACAAGCAGCA GGTCGCGGAG 
GTCTTCGCGC CCCTGCGCCG CCGGTCCGAG CGGCCCGCCT GGACGGGCTC GCCCGAGCGC 
AACCCGTCCG CGATCCCGCC GGTGGAGATC CCGCAGTGGA TCCGGGACCG GGCGGCCGCC 
AACGGTCACT CCAAGGAGGA GGGTGAGGCC GGGCCGGTGC TCACCCCGCC GGGATCCGGC 
GGCGACGTGC ACGGTGACCC GGGGGTCGGC GGCGCCGAGA CGCCTCCGGG CCTGCCGCCG 
CACTGA 

 

Protein sequence

MKRIFKGPWL WIVLAVVGVL LALQYLAPNR GGEEVDASKM QDLISSGEIK ELTFVDGGEQ 
QIKATLDNGD KVTAFWLDGT QAELDSQVQD QVDAGKIDSY TVEVPKPSLL GSILATLLPF 
ALIILLFLFL MNQVQGGGGR GVMQFAKSRA KLISKDMPKT TFGDVAGCEE AIEELGEIKE 
FLQEPAKFQA VGAKIPKGVL LYGPPGTGKT LLARAVAGEA GVPFYSISGS DFVEMFVGVG 
ASRVRDLFEQ AKENAPAIVF IDEIDAVGRH RGAGMGGGHD EREQTLNQLL VEMDGFDVRG 
GVILIAATNR PDVLDPALLR PGRFDRQIQV DAPDLNGRHM ILKVHSRGKP MSQDIDLLSV 
ARRTPGFTGA DLANVLNEAA LLTARSNQKL ITNANLDEAI DRVIAGPQRR TRLMSEKEKL 
ITAYHEGGHA LVAAALPGTD PVHKITILPR GRALGYTMVL PDEDKYSQTR SQMLDSLAYM 
LGGRAAEEMV FHDPTTGAGN DIEKATNLAR AMVTQYGMTE RLGAIKLGES NSEPFLGRDL 
GHARNYSEDV AAIVDEETKK LLANAHQEAF EILEENRDVL DALVLELVEK ETLDKQQVAE 
VFAPLRRRSE RPAWTGSPER NPSAIPPVEI PQWIRDRAAA NGHSKEEGEA GPVLTPPGSG 
GDVHGDPGVG GAETPPGLPP H