| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0439 |
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| Symbol | |
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| ID | 4597338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 470027 |
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| End bp | 471409 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 639775053 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_921668 |
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| Protein GI | 119714703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.358673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGGAC GTGACCGAGA CCACCCCACC CGGGGCGCCC GTCTCGCGGC CTGGCTGCCC
GTCGCCCTGG TGCTCGCCGT CCTGGCGGCG GCCGGCCTCG TGCTCTGGCT CGACCCGCCG
GCCTCGCCGC CCGAGGAGGA GCCGGCCGCG GTCCCGCCGC CCGCGGGGCT CACCGTCCAG
CCCCTCGTGG CGCCGGACCC GGTCGCCGAG CCGGCGAGCG GGGTGCCCGA TCCCGGGAAG
GTACGCCGGG CCCTCGCGCC GCTGCTCCGC GACGCCGACC TGGGCCCCCA CGTCCTCGCC
ACCGTGGCCG GCCTCGACGG CACGCTGCTC TACTCCAGCG GCACCGGCTC GGCCACGCCC
GCCTCGACCC TCAAGCTGCT GACCGCGGCA GCGGCCCTCG AGACCCTCGG CCCCGATCAC
ACCTTCGCCA CGACGGTCGT CGACGCCGGA CCGCGGCGGG TCGTGCTGGT CGGCGGCGGC
GACCCGCTGC TCGACCGCAA GGACGTCACC CGGCTGGCCC GCGACACCGC CACCGCCCTC
GCCGCCACGG GCCGCACGCG CGTGCGGGTC GACTACGACA CCGGCCTGTT CCGCGGCCCC
GAGGTCAGCC CGCACTGGCC CGCCGGCTAC CTGCCGGACG GCGTCGTCGC GCCGATCACT
CCGCTCTGGA TCGACGAGGG TCGCCCCGAG GACGGCTTCG GCCGGGTCGC GGACCCAGCC
GCGGTCGCGG CAGCGGCGTA CGCCAAGGCG CTGGCTCGCG CCGGCGTCAC CGTGCTCGGG
CCCCAGCGCG AGGCGGCGGC GCCCGCCGAC GTCGCGGAGC TGGCCCGCAC CGACAGCCTC
CCGCTCGACC GGATCGTCGA GCACACCCTG GCGACCAGCG ACAACGAGGC CGCCGAGGTG
CTCGCCCGCC ACGTGGGCCT CGCGACCTCC GGCGACGGGT CGTTCGCCGG CGGCGCCCGG
GCCCTGCTGC GGGTGCTCGA CGGGCTCGGG GTCCCCACGC AGGGCACCAC GACGTACGAC
GGCAGTGGGC TCTCCCGGGA GGACCGGCTC GACCCCGACA CGCTCACGGC GGTGCTCGAG
CTCGCCGCGT CGCCCGAGCA GCCCGACCTC CGGGCGGTGC TCACCGGGCT GCCGGTCGCC
GGCTTCACCG GCTCCCTCAC CGAGCGGTTC GCCGGGCCCG ACGACCAGGG CCGCGGCCTG
GTCCGGGCGA AGACCGGGAC GCTGTCGGGG GTGAGCAGCC TGGCCGGGAT CGTGACCGAC
CGCGAGGGCC GGCCGATGGT GTTCGCGCTG CTCGCCGACC GGATCGACCT GGTCGACACC
CTGGACGCCC GAGCCGCCCT GGACGGCGCG ACCGGTGCCC TCGCCGGCTG TCGCTGCGGC
TGA
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| Protein sequence | MGGRDRDHPT RGARLAAWLP VALVLAVLAA AGLVLWLDPP ASPPEEEPAA VPPPAGLTVQ
PLVAPDPVAE PASGVPDPGK VRRALAPLLR DADLGPHVLA TVAGLDGTLL YSSGTGSATP
ASTLKLLTAA AALETLGPDH TFATTVVDAG PRRVVLVGGG DPLLDRKDVT RLARDTATAL
AATGRTRVRV DYDTGLFRGP EVSPHWPAGY LPDGVVAPIT PLWIDEGRPE DGFGRVADPA
AVAAAAYAKA LARAGVTVLG PQREAAAPAD VAELARTDSL PLDRIVEHTL ATSDNEAAEV
LARHVGLATS GDGSFAGGAR ALLRVLDGLG VPTQGTTTYD GSGLSREDRL DPDTLTAVLE
LAASPEQPDL RAVLTGLPVA GFTGSLTERF AGPDDQGRGL VRAKTGTLSG VSSLAGIVTD
REGRPMVFAL LADRIDLVDT LDARAALDGA TGALAGCRCG
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