| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0401 |
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| Symbol | |
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| ID | 4597713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 430624 |
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| End bp | 432582 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639775016 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_921631 |
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| Protein GI | 119714666 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCATTCG CGATGTCCCC GGCGGCGTCG GCCGCTCTGA CCGATCTCGT CAGGGTGTCC
CGGCTCCTGG GTGCCGACCC CGCGCTCGTC CTTCACGGCG GCGGGAACAC GAGCCTGAAG
GCCACGACCA CCGACCTGAC CGGGTCGACC GTGGACACCC TCTTCGTCAA GGCGAGCGGA
CACGACCTCG CCTCGATCGA CGCGGCCGGC TTCGCACCGC TCCGGCTGGC ACGCCTGCGC
GAGATCCTGC CGCCCGTCGT CGTTCCCGAC GACCTGCTCA TCAACGAGCT GCGCTGTGCG
CTGCTCGACG CGGCGGCACC GGATCCCTCG GTGGAGACCC TGCTGCACGC GCTGCTGCCC
CGACCGGCCG TCATCCACTC ACACGCCGAC GCGTTGCTCG CGGTCGCCAA CACACCCGAT
GGCCGCGAGC GGCTCGCCGA CCTCTTCGGG GATCGCGTGA TCCTGGTGGA CTACGCCATG
CCGGGACCAG ACCTGGTGGC CGCCTGCGCG GCCGCCTGGA GCCGGGAGGG CGGCAACCAC
ACCCAGGGCG TCGTCGTGCT GGGGCACGGC CTGTTCACCG TCGGCTCCAC GCCGGACGAG
GCGTACCAGC ACCACGTCGA TCTGGTCACG GACGTGGCCG GCCTCCTGCG CGCATCCTCG
ACGCGCGGCC AGTCGCAGCC GGCTGCGCCC CTGCCGCCTG CAGACCCGCT GGCCGTGGCC
CGGCTGCGGC AGTCCCTGAG CCGGGCCGCC GGGCACCCGA TGGTGGTCAC CTCCCACCGC
GACAACGAGG TTGCGTCCTT CGTCGGGGAC GACCGCCTGC TCGCGGCCGC TCAGCGCGGG
CCGCTCACCC CCGACCACGT CATCTGGACC AAGCACAGCC CGATGATCGG CACCGATCTG
GACGCCTTCG TCCGGGCCGA GGACGACTAC TTCACCCGGC ACGCCACGCG CCGCGGCCGC
ACCCTGCTGC GGCTCGATGG GGCGCCCCGG GTGGTGCTCG ATCGCACCCT CGGCATGCTC
ACCGCGGGAC GAACGGCAGG CGAGGCGGCG CGAACCGCGG ACATCTACCG GCACACCCTC
GGCGCGATCG AGCTGGCCGA GGCCCTCGGC GGCTACCGGC CGGTCGAGGA GGAGCACGTC
TTCGACCTCG AGTACTGGTC GCTGCAGCAG GCGAAGCTCT CCCGCAAGGA CAGCCATCGC
CCGCTCTCCG GCCAGGTGGC GGTCGTGACC GGCGCGGCCT CGGGCATCGG GCACGCGTGC
GCGGTCAGCC TGCTGGAGTC GGGCGCCAGC GTGGTGGGCT GGGACGTCAG CCCATCGGTA
CGCGACGCGA TCTCCTCACC GGAGTGGCTC GGGCTCGCCG TCGACGTCAC CGACTCCGCT
GCGGTGACCG AGGCCATCCA GCGCGGGGTG GAGGCCTTCG GTGGGGTGGA CATCCTCGTC
GTCGCGGCGG GCATCTTCCC CACCAGCGCC AACCTCGGCG AGATGTCGAT GCAGGCCTGG
CGCCGGGCGA TGGCGGTGAA CGTCGACGCG GTCGCGGACC TCTACGGACA GATCCACCCG
TTCCTCGCCG CAGGCACCCC TTACGGCCGC GTCGTGCTGA TCGCGTCGAA GAACGTCGCC
GCCCCGGGCC CTGGCGCCGC GGCCTACTCC GCGTCCAAGG CAGCGGTGAC CCAGCTGACC
CGGGTCGCGG CCCTCGAGTG GGCCCCCCAT GGCATCCGCG TCAACATGAT CCACCCCGAC
GCCGTGTTCG ACACGGGCCT GTGGACACCG GAGCTGCTCG AGGCGCGAGC CGAGCACTAC
GGCATGACGG TCGAGCAGTA CAAGCGTCGC AATCTCCTCT CCACGGAGGT CACGAGCAAG
GCGGTCGGGG ACCTGGCCGT CACCCTGGCG GGTCCCGCCT TCGCCGCCAC GACCGGCGCC
CAGATTCCCA TCGACGGCGG CAACGAGCGG GTCATCTGA
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| Protein sequence | MPFAMSPAAS AALTDLVRVS RLLGADPALV LHGGGNTSLK ATTTDLTGST VDTLFVKASG
HDLASIDAAG FAPLRLARLR EILPPVVVPD DLLINELRCA LLDAAAPDPS VETLLHALLP
RPAVIHSHAD ALLAVANTPD GRERLADLFG DRVILVDYAM PGPDLVAACA AAWSREGGNH
TQGVVVLGHG LFTVGSTPDE AYQHHVDLVT DVAGLLRASS TRGQSQPAAP LPPADPLAVA
RLRQSLSRAA GHPMVVTSHR DNEVASFVGD DRLLAAAQRG PLTPDHVIWT KHSPMIGTDL
DAFVRAEDDY FTRHATRRGR TLLRLDGAPR VVLDRTLGML TAGRTAGEAA RTADIYRHTL
GAIELAEALG GYRPVEEEHV FDLEYWSLQQ AKLSRKDSHR PLSGQVAVVT GAASGIGHAC
AVSLLESGAS VVGWDVSPSV RDAISSPEWL GLAVDVTDSA AVTEAIQRGV EAFGGVDILV
VAAGIFPTSA NLGEMSMQAW RRAMAVNVDA VADLYGQIHP FLAAGTPYGR VVLIASKNVA
APGPGAAAYS ASKAAVTQLT RVAALEWAPH GIRVNMIHPD AVFDTGLWTP ELLEARAEHY
GMTVEQYKRR NLLSTEVTSK AVGDLAVTLA GPAFAATTGA QIPIDGGNER VI
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