| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0138 |
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| Symbol | |
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| ID | 4597587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 152214 |
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| End bp | 154925 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639774748 |
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| Product | SNF2-related protein |
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| Protein accession | YP_921370 |
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| Protein GI | 119714405 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.021253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTCG TCCCGGTCAC CGGCCCGGCG ACGTTCCGTG CCGCCGACCC GCCGCGCGAG
GGCGTCGTCG AGTTCACCGA CGACCGGCGC ACCGTGAGCC TGCCGATCCG GGCGGCCCTG
CCGGTGCTGA CCAAGGCCCG CTCGCGCGAC GACCTGCACC CGAGCGTCGG GGTGCTGTCC
GGGGCCGCGC TGCTCGCCCT GCGGCTGGTC GCCGCGGGCA AGTTCGCTCC GGCGGGGAGC
AGCCCGCCCG CCTGGCGGGT GGCGGGCCTG GACGCCGACG ACGAGCAGCG GATCGTGTTG
CTGGCGCGCA ACGGACCGGA CGACGAGCAG CTGGTGCGCG ACCTGCTCGA CGCCGTGGCC
GACGCCATGC CCAGGACCCA GCCCAGGACC CAGCCCAGGA GCCGGCCCAG CGCCGAGCCG
AGCGGGACGA CGGTCTCCCG GGAGCGCCGA CCGACGTTCG AGGAGCGCCT CCAGGCACGG
CTGGCGCGGC ACCAGCGCGT CGACGCGCGC GCCCTGCCGC AGCTGGTCAC CATCTCGCTG
CGGGTCGAGG CGGACGAGGA GGAGCTGGTC GCGGGCGCCG TACGCCTGGT GGCGCAGGCG
CACGACGAGC AGAACCCGCT GCACCTGTGC GACCTCGCGC TGCTGTGGAC CGGGACACCG
CAGGAGCACG GCTTCGGCGA GCGGGCCCGC ACGCACGCGA CGATCGCGCT CCGCGCGGCT
GCGGACGCGT GGCCGGTGCT CGACCGGCTG TTGGAGCTGC GGGTGCCCGA CCAGCTCACC
CTGGACAGCG ACGAGCTGGT CAGCCTGCTC GACGAGGGCG TCGGTGCGCT GCGTGCGGCG
GGCGTCGACG TGCTGTGGCC CAAGGCGCTC GGCCGCGACC TCACCGCGAC CACGGTCCTC
GACCGGGCCG CCCCGATGAC CCGGGAGGAG CCGCTCAACG AGCCGGTGCT CGGCGCCGAG
GCGCTGTTCG CGTTCAACTG GCAGATCGCG CTGCACGGCG ACCCGCTCAC CGCGGAGGAG
ATGGACCGGC TCGCGACGTC CGCCTCGCCG CTGCTGCGGC TGCGGGGCAG TTGGACGGTC
GTCGATCCCT CGATCGCGCG GAAGGCGAAG AAGCGGCTGG TCCGCACCGT CAAGCCCGCC
GAGGCCGTCG CCGCCGCGCT CACCGGGACC GCGCAGATCG CCGCCCCGGG TGGTGAGCAG
AGCGAGCAGG ACGTCGTCGT CGGCGCCTCG CTCCTCAAGG TCCGGGACCG GCTCCTGGGC
GCCGCCACCA GGGAGCCGGT CGAGCCTCCG GCCGCGCTGC GGGCCACGCT GCGCGACTAC
CAGCGGCACG GACTCACCTG GCTGGCGGAG ATGACCTCGC TGGGGCTCGG CGCCTGCCTG
GCCGATGACA TGGGGCTGGG CAAGACCGTC ACGCTGATCG CGCTGCACCT GCACCGGGCC
GAGCGCGGCC ACCGAGGCCC GACGCTGGTG GTCTGCCCGG CGAGCCTGCT CGGCAACTGG
GAGGCGGAGG TCCGCCGGTT CGCCCCGGGT GTGCCGGTGG TGCGCTTCCA CGGCACGTCC
CGTGACGTCG AGGCGGCCGG CGACGGGTTC GTGCTGACGA CGTACGGGAC GATGCGGCGC
GACGCCGAGG CGCTCGGCTC GGTGCGGTGG GACCTCGTGG TCGCCGACGA GGCCCAGCAC
GTGAAGAACC CGCGTACGGC GACGGCTCGG GCGCTCCGGT CGATCACGAG CGCGGCGCGC
GTCGCCCTCA CCGGCACCCC GGTCGAGAAC GACCTCACCG AGCTGTGGGC GATCCTCGAC
TGGACCACGC CCGGTCTGCT CGGCAGTCGC AACGCCTTCC GCAAGGCGTG GGCGGCGCCG
ATCGAGTCCG GCCGCGAGCC CGCGAAGGCC CGGCAGTTCG CGGACCTGAT CGGGCCATTC
CTGCTCCGCC GTCGCAAGTC CGACCCCGGC ATCGCCCCCG AGCTCCCGGC GAAGACCGAG
ACCGACCACC CGCTGCGGCT GACCCGGGAG CAGGTGGTGC TCTACGAGTC GTTCGTGCGC
GACACGATGG CGCGCATCGA GCGCGCCGAC CCCTCGGACC CGGTCGCGCG GCGCGGGCTG
GTGCTGACCC TGCTCACCGG CCTCAAGCAG ATCTGCAACC ACCCCGACCA CTTCTTGAAG
CGCTCCGGCG CCCGGCTGTC CGGCCGGTCG GAGAAGGTCG ACCTGCTCGA CGAGCTGGTC
GGCACCGTGC TCGCCGAGGA CGGGGCGGTG CTGGTGTTCA CCCAGTACGT CGCGATGGCG
CGACTGCTGG AGGGCCATCT CGCCCGCGCC GGCGTACCCC ACCAGCTGCT GCACGGCGGC
ACTCCGGTCC GGGAGCGGGA GGCGATGGTG GCGCGGTTCC AGGCGGGTGA GACGCCGGTG
TTCCTGCTCT CGCTCAAGGC CGGTGGCACC GGGCTCAACC TGACCCGCGC CGACCACGTC
GTGCACGTCG ACCGGTGGTG GAACCCGGCC GTGGAGGAGC AGGCGACCGA TCGCGCCTAC
CGGATCGGGC AGACCAAGCC GGTGCAGGTG CACCGGATGA TCACCCGCGG CACCGTCGAG
GAGAAGGTCG CCGAGCTGCT GACCCGCAAG CGTGCCCTCG CCGACGCGGT GCTCTCCCGG
GGCGAGGCGG CGTTGACCGA GCTCAGCGAC GACGAGCTGC GCGACTTCGT CGCGCTGCGC
CGGGACCCCT GA
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| Protein sequence | MSFVPVTGPA TFRAADPPRE GVVEFTDDRR TVSLPIRAAL PVLTKARSRD DLHPSVGVLS
GAALLALRLV AAGKFAPAGS SPPAWRVAGL DADDEQRIVL LARNGPDDEQ LVRDLLDAVA
DAMPRTQPRT QPRSRPSAEP SGTTVSRERR PTFEERLQAR LARHQRVDAR ALPQLVTISL
RVEADEEELV AGAVRLVAQA HDEQNPLHLC DLALLWTGTP QEHGFGERAR THATIALRAA
ADAWPVLDRL LELRVPDQLT LDSDELVSLL DEGVGALRAA GVDVLWPKAL GRDLTATTVL
DRAAPMTREE PLNEPVLGAE ALFAFNWQIA LHGDPLTAEE MDRLATSASP LLRLRGSWTV
VDPSIARKAK KRLVRTVKPA EAVAAALTGT AQIAAPGGEQ SEQDVVVGAS LLKVRDRLLG
AATREPVEPP AALRATLRDY QRHGLTWLAE MTSLGLGACL ADDMGLGKTV TLIALHLHRA
ERGHRGPTLV VCPASLLGNW EAEVRRFAPG VPVVRFHGTS RDVEAAGDGF VLTTYGTMRR
DAEALGSVRW DLVVADEAQH VKNPRTATAR ALRSITSAAR VALTGTPVEN DLTELWAILD
WTTPGLLGSR NAFRKAWAAP IESGREPAKA RQFADLIGPF LLRRRKSDPG IAPELPAKTE
TDHPLRLTRE QVVLYESFVR DTMARIERAD PSDPVARRGL VLTLLTGLKQ ICNHPDHFLK
RSGARLSGRS EKVDLLDELV GTVLAEDGAV LVFTQYVAMA RLLEGHLARA GVPHQLLHGG
TPVREREAMV ARFQAGETPV FLLSLKAGGT GLNLTRADHV VHVDRWWNPA VEEQATDRAY
RIGQTKPVQV HRMITRGTVE EKVAELLTRK RALADAVLSR GEAALTELSD DELRDFVALR
RDP
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