| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0133 |
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| Symbol | |
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| ID | 4597582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 146475 |
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| End bp | 148619 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639774743 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_921365 |
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| Protein GI | 119714400 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.931384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGCCC CAGCCGAGAC CGACGTACGC CGCAGCGCGG AGGCGCACCT GCGCGCGCTC
GTCGGGCCGC GGCCGGGTGA GCCGGAGCCG GTGCTGCGCG AGGACCAGTG GGCCGCGATC
GAGGCGCTCG CCGTGCACCG CCGCCGGGCG CTCGTTGTGC AGCGCACCGG CTGGGGCAAG
TCCGCGGTCT ACTTCGTGGC GACGCTGTTG CTGCGCGAGC AGGGTGCCGG GCCGACGGTC
ATCGTCTCCC CGCTGCTGGC CCTGATGCGC AACCAGATCG CGGCGGCCGA GCGGGCCGGG
ATCCGCGCGG TGACGATCAA CTCCACCAAC ATCGAGGACT GGGAGCCGAT CCACGAGGCG
ATCGCGGCCG GCGAGGTCGA CGTGCTGCTG GTCAGTCCCG AGCGGCTCAA CAACCCGGGC
TTCCGCGACG AGGTGCTGCC CCGGCTGGCC GCGACCTGCG GCCTCCTGGT CGTCGACGAG
GCGCATTGCA TCTCCGACTG GGGCCACGAC TTCCGGCCCG ACTACCGTCG GATCCGCACC
CTGCTGGGCG AGCTCCCCGA CGGCATCCCG GTGCTCGCGA CCACCGCGAC CGCCAACGCC
CGGGTCACCG ACGACGTCGC CGAGCAGCTC GGGGTCTCGA CGGGCTCGGC CACCGACGGC
TTCGGCGAGG TCCTGGTGCT GCGCGGTTCG CTGGACCGCG AGTCGCTGCG CCTCGGCGTG
GTCCGGCTCC GGACCGCGGA GCAGCGGTTG GCCTGGCTCG CCGACCACCT CGCCGAGCAG
CCCGGGTCCG GCATCGTCTA CTGCCTGACG GTCGCCGCCA CCCAGGAGAT CGCCGACTAC
CTGCGCTCGC GCGGCCACGA GGTCGCGGCG TACTCCGGCC AGACCGACCC GACCGAGCGG
CACGCCCTCG AGCAGGACCT GGTGAATGGC CGGGTCAAGG CGCTGGTCGC CACGAGCGCG
CTCGGCATGG GCTTCGACGC CACCCTCGGC TTCGTGGTCA ACATGGGCGC GCCGCCCTCG
CCGGTCGCCT ACTACCAGCA GGTCGGCCGC GCCGGCCGCG GCACGACTCT GCCGCCGGAG
GGGGCGACCG TCGTGCTGCT GCCCGCGATC GAGGACCGCG ACATCTGGGC CTACTTCGCC
TCCCTCGCCT TCCCGCGCGA GGAGCAGGTC CGCCGCACGC TCGAGGTGCT GGGGGCGGAG
GGCCGGCCGC TCAGCACGGC CACCCTGGAG ACCTACGTCG ACCTCAACCG CACCAGGCTG
GAGACGATGC TCAAGGTGCT CGACGTCGAC GGCGCCGTAC GCCGGGTCCG CGGCGGCTGG
GAGGCCACCG GTCGCGAGTG GTCCTACGAC GAGGAGCGCT ACCGCCGGGT GACCGAGGCG
CGCCAGCGCG AGCAGCAGGC TATGCTCGAC TACATCGCGA CCGACGCCTG CCGGATGCGG
TTCCTGCGCG ACCAGCTCGA CGACCCGGAA GCCGAGGACT GCGGGCGCTG CGACAACTGC
GGCGGGCTCA CCCTCTCCGC CGACGTCTCG GCCGCCGCGC TCGAGGACGC CGGCGCCCGG
CTGGCCCGGC CCGGGGTCGC CGTCGAGCCG CGGAAGATGT GGCCGAGCGC GCTGGCCAAC
CTCGGCATCG AGCTCAAGGG CAAGATCGCC GAGGGCGCCC AGGAGGGCCG GGCGGTGGCC
CGGCTCACCG ACCTCGGCCA CGGCCAGGCG CTGCGCGAGC TCTTCGCGCC GGCGACCCCG
GACGGCCCGG TCCCGGTGCC GTTGGTCCGC GCGGTCCTCG AGGTGCTCGG TGACTGGCGG
CCCCCGGTCG ACGCGATCGT GGTCGTCGAG TCGCAGACCC GGCCCACGCT GACGGCCGAC
CTGGCCGCCG GCCTGTCCCG CCACCTCGGG GTCCCCGTGG TGGGACGGTG GGCGATCGTC
AACCCCGACA TCGTCCCCGG CCAGGGGGCC GCCAACTCCG CGCAGCGGGT CGCCGCCGTC
GGGCGGCGCT TCGCCCTCCA GGTCGACCAG CCGCTGGACG GGCTGCGGGT GCTGCTCGTC
GACGACCGCA CCGACACCGG ATGGACGCTG ACCCTGGCGG CTCGCGCCGT ACGCCGCGCC
GGCGCCGCGG AGGTCCGACC GCTGGTCCTC GCCACCACCA CCTGA
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| Protein sequence | MSAPAETDVR RSAEAHLRAL VGPRPGEPEP VLREDQWAAI EALAVHRRRA LVVQRTGWGK
SAVYFVATLL LREQGAGPTV IVSPLLALMR NQIAAAERAG IRAVTINSTN IEDWEPIHEA
IAAGEVDVLL VSPERLNNPG FRDEVLPRLA ATCGLLVVDE AHCISDWGHD FRPDYRRIRT
LLGELPDGIP VLATTATANA RVTDDVAEQL GVSTGSATDG FGEVLVLRGS LDRESLRLGV
VRLRTAEQRL AWLADHLAEQ PGSGIVYCLT VAATQEIADY LRSRGHEVAA YSGQTDPTER
HALEQDLVNG RVKALVATSA LGMGFDATLG FVVNMGAPPS PVAYYQQVGR AGRGTTLPPE
GATVVLLPAI EDRDIWAYFA SLAFPREEQV RRTLEVLGAE GRPLSTATLE TYVDLNRTRL
ETMLKVLDVD GAVRRVRGGW EATGREWSYD EERYRRVTEA RQREQQAMLD YIATDACRMR
FLRDQLDDPE AEDCGRCDNC GGLTLSADVS AAALEDAGAR LARPGVAVEP RKMWPSALAN
LGIELKGKIA EGAQEGRAVA RLTDLGHGQA LRELFAPATP DGPVPVPLVR AVLEVLGDWR
PPVDAIVVVE SQTRPTLTAD LAAGLSRHLG VPVVGRWAIV NPDIVPGQGA ANSAQRVAAV
GRRFALQVDQ PLDGLRVLLV DDRTDTGWTL TLAARAVRRA GAAEVRPLVL ATTT
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