| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0120 |
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| Symbol | |
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| ID | 4597569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 133252 |
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| End bp | 134268 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639774730 |
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| Product | daunorubicin resistance ABC transporter ATPase subunit |
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| Protein accession | YP_921352 |
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| Protein GI | 119714387 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0230448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGG CACGAGGACT CGTGCAGACG TTCCACACCG GACGAGGCAA GACCGCCAAG
GACGTCCGGG CCGTCGACGG CGTTGACCTC GACGTCCACG AGGGCGAGGT GGTCGGGTTC
CTCGGACCCA ACGGCGCCGG CAAGACCACC ACGCTGCGGA TGCTCACCAC GCTGCTCAAG
CCCACGGCAG GCAGCGCCAC GGTGGCCGGC TACGACGTGG TCACCGAGTC GGTGCAGGTA
CGCCGCAGCA TCGGCTACGT CTCGCAGGTG GGATCGACGT TCTCCGGCGC CTTCGCCGGC
GACGAGGTCG TCGACCACGG GATGCTGTAC GGGATGTCCC GGGCCGAGGC CGTACGCCGC
GGCCAGGAGC TGTTCGCGCA GCTCCAGCTC GACGGGCTGT GGCGGCGGAT GCCCAAGAAC
ATGTCCGGCG GGCAGAAGCG CCGCCTCGAC GTGGCGATGG GGCTGATCCA CGACCCCGGG
CTGGTGTTCC TCGACGAGCC GACCACCGGG CTCGACCCGC AGGCGCGGGC GAACCTGTGG
GAGCACATCC GGGGACTGCG CGCCCGGCTG GGCGCCACGG TCTTCCTCAC CACCCACTAC
CTCGACGAGG CCGACGCGCT CGCCGACCGG ATCGTGATCA TCGACCAGGG CCGGATCGTC
GCCTCGGACA CGGCGGACAA CCTCAAGGCC CAGGTCGCCG GCGACCTCGT GGACCTCGAG
GTCGCCGACC CGGGCCAGGT CGCCGTCGCC GCGGCCCGCC TGGAGGCGCT GGTGCACGGC
GCCGACGGCG TCGAGACCGA CCACCGGCAC GTCCGGGCGC GGGTGCAGCG CGCCGGGCGC
GCCGTACCCG CGCTGCTGCG AGACCTCGAG AACGCCGGGG TGGCCCTGGA CTCGATCGAG
GTGCTGCGCC CCACGCTCGA CGACGTCTTC CTCTCCCTCA CCGGCCGGTC GCTGCGCGAC
GCCGACTCCA CGGACCCCAG CGACGCCCCG ACCCAGCCCG AGGAGGTGCT CGCGTGA
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| Protein sequence | MIQARGLVQT FHTGRGKTAK DVRAVDGVDL DVHEGEVVGF LGPNGAGKTT TLRMLTTLLK
PTAGSATVAG YDVVTESVQV RRSIGYVSQV GSTFSGAFAG DEVVDHGMLY GMSRAEAVRR
GQELFAQLQL DGLWRRMPKN MSGGQKRRLD VAMGLIHDPG LVFLDEPTTG LDPQARANLW
EHIRGLRARL GATVFLTTHY LDEADALADR IVIIDQGRIV ASDTADNLKA QVAGDLVDLE
VADPGQVAVA AARLEALVHG ADGVETDHRH VRARVQRAGR AVPALLRDLE NAGVALDSIE
VLRPTLDDVF LSLTGRSLRD ADSTDPSDAP TQPEEVLA
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