Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0100 |
Symbol | |
ID | 4600073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 112886 |
End bp | 114469 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774710 |
Product | ABC transporter related |
Protein accession | YP_921332 |
Protein GI | 119714367 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.145472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGATC CGGCCCGCCC GGTCCTCCGG ATGAGGGGCG TCGCCAAGAC GTTCGGCCTC ACCCGGGTGC TCCAGGACGT CGACCTCACC GTGCGCCGCG GTGAGGTCCA CGGCCTGCTC GGCCAGAACG GGTCGGGCAA GTCGACGCTG ATCAAGATCC TCGCCGGGTT CCACACCCCG GACGAGGGGT CGATCGAGCT CGACGGTGCG TCGGTCGACC TGCCGCTGTC CGCCGTGGAC CGGCGCAAGC ATCGGCTGCG GTTCGTCCAC CAGGACCTGG CGCTGCTGCC GTCGTTGACG GTGCTCGAGA ACCTGCTCGC CGACGACGTC GCCACGGGGC CGGGCATCCG GCCCCGGCGG CGGCGCGCCG AGCTCGCCCG CGCCACCGCG CAGTTCGACC GGTTCGGGAT CTCGCTGCGC CCGGACACGC TCGTGCGGGA CATCTCGCGC CTGGACCGGG CCAAGCTGGC GATCGCCCGC GCCGTCAGCC ACCTCGGTGA CGATGACGGT GACGTGGCCG GCGCGGGTCG GGGGCTGCTG GTGCTCGACG AGCCGACCGC CTTCCTGCCG CACAGCGAGG TCGCCGAGCT GATCGCGCTG ATGCGGGCGG TGGCCGCGCA GGGCACGGGC GTCCTGTTCG TGTCGCACGA CCTCGACGAG GTCCTGACGG TGACGGACCG CGTCAGCGTG CTGCGCGACG GCCAGCTGGT CGGCAGCGAG GACACCGCCT CGCTGGCGCG CGGGGATCTC GTGCGGTTGA TCGTGGGCCG GCCGGTCTCC GTGTTGAGCG CCGGCTCCGC GCCGGTCCCC GCGAGCCAGG AGCGGCCGCG GCTCCAGGTG AGCGCGCTGC GCGGTGGCGC GGTGCAGCAC CTGGACCTGA GCGTGCACCC GGGTGAGGTC GTCGGCGTCA CCGGCGTGAT CGGGTCCGGG TTCGACGAGG TGACCCAGCT GCTCTTCGGA GCGCTGCGGG CCAGCGGCGG GTCGGTCGCG ATCGACGACC TCGCGCTCGA GGCGCGCCGG CTCTCGCCGG CCACGGCGAT CAAGGCCGGC GTCGCCTACC TCCCCAGTGA CCGTGCGGTC CAGGGCAGTG CCCCGAGCCT GACCGTGGGG GAGAACGTCG CGCTGCTCTC GCTGCGCAAG GGTGGCGGTC CCTTCGCCCT GACCGGCCGG AGGCTCGAGC GGCACGCGGG CAAGCTGCTC CGCGACCTCG ACGTACGTCC GCCCGAGCCC ACGCTCGCCT ACGCCTCCCT CAGCGGCGGC AACCAGCAGA AGGCGATGAT GGCCAAGTGG CTGGTGACCG GCCCCAAGGT CCTGCTGCTC AGCGAGCCCA CCCAGGGTGT CGACGTCGGG GCGCGCGAGC AGATCTTCAC CCTCATCGCC GAGGCCGCCC GGCAGGGCTG CGCGGTCGTG TGCTCGAGCT CCGATCTCGA CCAGCTGGCC CAGATCTGCA ACCGCGTGCT GCTCATGCGG CGCGGTGTCA TCTCGGACGA GGTGCACGGT GAGGCCGTCA CCAAGGCCGG CCTGACCGAG ATGCTGTTCG CCGACGCGGT GGTCAGATCG CGCCGCGCCA CCTCCGACGC CTGA
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Protein sequence | MTDPARPVLR MRGVAKTFGL TRVLQDVDLT VRRGEVHGLL GQNGSGKSTL IKILAGFHTP DEGSIELDGA SVDLPLSAVD RRKHRLRFVH QDLALLPSLT VLENLLADDV ATGPGIRPRR RRAELARATA QFDRFGISLR PDTLVRDISR LDRAKLAIAR AVSHLGDDDG DVAGAGRGLL VLDEPTAFLP HSEVAELIAL MRAVAAQGTG VLFVSHDLDE VLTVTDRVSV LRDGQLVGSE DTASLARGDL VRLIVGRPVS VLSAGSAPVP ASQERPRLQV SALRGGAVQH LDLSVHPGEV VGVTGVIGSG FDEVTQLLFG ALRASGGSVA IDDLALEARR LSPATAIKAG VAYLPSDRAV QGSAPSLTVG ENVALLSLRK GGGPFALTGR RLERHAGKLL RDLDVRPPEP TLAYASLSGG NQQKAMMAKW LVTGPKVLLL SEPTQGVDVG AREQIFTLIA EAARQGCAVV CSSSDLDQLA QICNRVLLMR RGVISDEVHG EAVTKAGLTE MLFADAVVRS RRATSDA
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