Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0099 |
Symbol | |
ID | 4600072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 111687 |
End bp | 112889 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639774709 |
Product | ABC-type sugar transport system periplasmic component-like |
Protein accession | YP_921331 |
Protein GI | 119714366 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC AGATCCGGTC TGCACCGGGC GTGCGGCCGC GGCGGCTCGC GGTCGCCGCG CTCCTGCTGC CCCTCGTCCT GGCGGCCTGC TCCAAGCCGG GCGACCCGGC GTCGGGCGGC GGCGAGTCCG CGAAGGGCGA GGTCACGCAG GCCGCCACCG ACACGGTCGA GAAGTTCAAG GCGGTCCCGG ACTTCGTCTC GCCGGGTCCC GCGGTGGACG TCGCGAGCCT GGCCGGCAAG AGCGTCTTCG TCATCCCGCT GCTGACGACC AACGACTACA ATATCCAGAT CAACGCGGCG ATGGAGCGGG TCGCGAAGCT CGCGGACGTC GACTTCGAGG TCTACACCAA CGAGGGCCAG CCCAACCAGT GGGTCGCCGG CATGAACCAG GCGATCGCCA AGGGCGTCGA CGTCATCATC CTCAGCGGCG GCACCGACCC CCGCGCGCTG GAGCCGCAGA TCAAGGAGGC CCGCGACCGG GGCATCAAGG TCGTGGTGAG CATGTTCTGG GACACCTCGG CCCAGTTCAC ACCCGACTGC TCCGGGCTCA GCGTGGACTG CGTCGACGGC GTGGACGCCA TCGTGGCCGC GCCGTACCAG ACCGCCACGC GCCTGGACGC CGACTGGATC GCCGTCGACT CCGAGGGTGC CGCGAAGATC CTGGTGGTGA CGTCGAACGA CGCGGGCCCG AGCCCGGGCC AGGAGGCCGC CTTCAAGGAC GAGATCGCGA CCGCCTGCCC CTCCTGCGAG GCGACGTTCG CCAACGTGCC GATCAGCAAG TGGACGACCT CCGTGCAGTC GACCGTGCAG TCCGAGCTCG TCCGCAACCC CGACATCGAC TACGTCGTGC CGCTCTACGA CAACATGGCC AGCTACGCCG TCGCCGCCAT CACCGCGGCC GGCAAGCAGG GCCAGGTCAA GGTCGTCACC TTCAACGGCA CCCCCGCGGT GCTCAAGATG ATCCAGGACG GCGACATCGT GACCATGGAC GTCGGGGAGT CCCTCGAGGG TGCCGGGTTC GCCGCGATGG ACAACGCCTT CCGGCTGATG GCCGGCATGG AGCCCTCGCA GGTGGCCGAC ATCGTGCCAG TGCGGATCTT CGACACCACC AACATCGACG AGGCCGGCAC CCCGCCGGAG GTCAACAAGG GCTACGGGGA CGACCTGGAG GCCCAGTACC TCGAGGTCTG GGGCCTCGGG TGA
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Protein sequence | MKKQIRSAPG VRPRRLAVAA LLLPLVLAAC SKPGDPASGG GESAKGEVTQ AATDTVEKFK AVPDFVSPGP AVDVASLAGK SVFVIPLLTT NDYNIQINAA MERVAKLADV DFEVYTNEGQ PNQWVAGMNQ AIAKGVDVII LSGGTDPRAL EPQIKEARDR GIKVVVSMFW DTSAQFTPDC SGLSVDCVDG VDAIVAAPYQ TATRLDADWI AVDSEGAAKI LVVTSNDAGP SPGQEAAFKD EIATACPSCE ATFANVPISK WTTSVQSTVQ SELVRNPDID YVVPLYDNMA SYAVAAITAA GKQGQVKVVT FNGTPAVLKM IQDGDIVTMD VGESLEGAGF AAMDNAFRLM AGMEPSQVAD IVPVRIFDTT NIDEAGTPPE VNKGYGDDLE AQYLEVWGLG
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