Gene Noca_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0096 
Symbol 
ID4600069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp107763 
End bp108863 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content72% 
IMG OID639774706 
Producthypothetical protein 
Protein accessionYP_921328 
Protein GI119714363 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGA CCCCGACCGA CCTGATCCCG ATGGCCCGCG GCGCGGCCGT GCTGGGCGGC 
GGCGGCGGCG GTGACCCCCA CATCGGGCGG CTGCTCGCCG CGAGCGCCAT GCGCGAGCTC
GGCGACGTCG AGATCGTCTC CCCCGAGGAG GTGCCCGCGA CCGCCTGCGT GCTGCCCATC
GCGATGATGG GTGCGCCGAC GGTGATGGTC GAGAAGATCC CGTCGGCCGG CCAGATCTCC
CTGGCGCTGG AGACGCTCGC CCGCTACCTG GGCCGCACGC CCACCCACGT CGCCTGCATG
GAGGCGGGCG GGGTGAACTC GATGGTGCCG TTCGTCGCGG CCGCCCGCCT GGGGCTGCCG
CTGATCGACG GCGACGCCAT GGGCCGCGCC TTCCCGGAGC TCCAGATGGT GCTGCCCACC
ATGTCCGGCG TCTCGGCGAC CCCGATGTCG ATCGTCGACG ACAAGAACAA CAAGGGCGTC
TTCGACACGA TCGACAACAA CTGGGCCGAG CGGCTGGCCA GGTCCGCGAC CATCGACATG
GGCTGCGCCC CGATCGTCTC GCTCTACGCG ATGTCCGGGA GCGAGGTGCG CGACTGCTTC
GTGCCCGGCA CCCTCAGCCT CTGCCTCTCG ATCGGTTCGG CCATCGAGAG CGCGCGGGCG
GTCAACCAGG ACCCGGTGGA GGCGCTGGTC GGCGCCCTGC GCGGGAAGCT GATCCACACC
GGGAAGGTCG TCGACGTCAC CCGTCGTACC GTCGCCGGGT TCGCCCGCGG GGAGGCCGTC
GTCACCGGGC TGGACGCCGC CGCCGGGAGC CAGCTGGTCC TGAAGTTTCA GAACGAGCAC
CTCATCGCCG AGTTCGACGG CGAGGTGCTC GTCACGACGC CGGACCTCAT CGTCGTCGTC
GACGCCGAGA CCGGTGAGCC GATCACGACC GAGACCCTGC GCTTCGGCCA CCGGGTCGCG
GTCGTCGCCG CTCCGATGGA CGAGCGGTGG CACACGCCGG CGGGCATCGA GCTGGTCGGG
CCCCGCTACT TCGGCTACGA CGTCGACCCG ATCCGGTTCG ACGGCACCCC CTCGGAGGGC
GCCCTCCTAG CCCACGTCTG A
 
Protein sequence
MRVTPTDLIP MARGAAVLGG GGGGDPHIGR LLAASAMREL GDVEIVSPEE VPATACVLPI 
AMMGAPTVMV EKIPSAGQIS LALETLARYL GRTPTHVACM EAGGVNSMVP FVAAARLGLP
LIDGDAMGRA FPELQMVLPT MSGVSATPMS IVDDKNNKGV FDTIDNNWAE RLARSATIDM
GCAPIVSLYA MSGSEVRDCF VPGTLSLCLS IGSAIESARA VNQDPVEALV GALRGKLIHT
GKVVDVTRRT VAGFARGEAV VTGLDAAAGS QLVLKFQNEH LIAEFDGEVL VTTPDLIVVV
DAETGEPITT ETLRFGHRVA VVAAPMDERW HTPAGIELVG PRYFGYDVDP IRFDGTPSEG
ALLAHV