| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0082 |
|---|
| Symbol | |
|---|
| ID | 4600055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 92896 |
|---|
| End bp | 94077 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639774693 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_921315 |
|---|
| Protein GI | 119714350 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACTGCG ACGTCGTCGT GATCGGCGCG GGCATCGTCG GGGCTGCCTG TGCTCGCCGA
CTGGCCCGAG CGGGCTTGGC CGTCACCGTC GTGGACCGTA GCGCGGCCGC AGGGGGCACG
ACAGCACACG GCGAGGGCAA CCTGCTCGTC TCCGACAAGC GGGCCGGCGC CGAGCTCGAC
ATCGCCCAGT ACTCGGCGGA GCTGTGGCGC CAGCTCAGCG TGGAGCTGGC CGACGAGCTC
GGGCCGGAGT TCCCGCCGCT GGAGTTCGAG GAGAAGGGCG GCCTGGTGGT CGCCACCGAC
GAGCGGGGCG CGGGCCCCCT CGTCGAGCTG GCGGCGAGTC AGTGTCAGGC GGGGGTTCGG
GCCGAGGTGC TCTCGAGCTC CGAGGCCCGA CGCCTCGAAC CCGAGCTGAC CCCGTCGACC
GTGGCGGCCG TGCACTATCC GGAGGACGCG CAGGTGCAGC CGGTCGTCGC GGCCGAAGCG
CTGCTGGCGT CGGCCCGCCG TGCGGGCGCC CGGATCCTCC CGCACACGGA GGTCACCGGC
CCGGTGCTCT CCGAGGGCGG CCGGTTGGGT GGTGTCACCA CGACGGCGGG CCCGATCCGG
GCGACGCACG TGGTCCTCGC GGCGGGGCCC TGGTCGGCCG GAGTCGCCTC GTCCCTCGGC
GCCACGATCC CGGTCGTCCC GCGGCGCGGC ATGGTGCTGG TGACGACGAG GATGCGGCAC
CGGATCTTCC GGAAGGTCTA CGACGCCGAC TACGTCGGCG CCGTCGGCTC GAACGACTCT
GACCTCCAGA CGTCCAGCGT CATCGAGAGC ACGGCGTCCG GCACGGTCCT GATCGGCTCC
TCACGGCAGA TGATCGGGTT CGACGACTGC CTGCGCGTGC CGGTCCTCGA GGAGCTGGCG
CGCAAGGCCA TCGATCTCTT CCCGTTCCTC CGCACCGCCT CGGTCATGCG GGTCTACGGG
GGGTTCCGCC CGTTCACGCC GGACCACCTG CCGCTCATCG GGCCCGACGT CACCGTCCCC
GGGCTCTGGC ACGCGAACGG GCACGAAGGA GCCGGCATCG GACTCGCGCC GGCCACGGGC
GAGATCCTCG GCGCCCTGGT CGCAGGTGAG CGGCCGGCGG TCGACGCGTC ACCGTATCTG
CCGGACCGGG CTGCTCTCGT GCCTGCCAGG GGCGTGCGAT GA
|
|---|
| Protein sequence | MDCDVVVIGA GIVGAACARR LARAGLAVTV VDRSAAAGGT TAHGEGNLLV SDKRAGAELD
IAQYSAELWR QLSVELADEL GPEFPPLEFE EKGGLVVATD ERGAGPLVEL AASQCQAGVR
AEVLSSSEAR RLEPELTPST VAAVHYPEDA QVQPVVAAEA LLASARRAGA RILPHTEVTG
PVLSEGGRLG GVTTTAGPIR ATHVVLAAGP WSAGVASSLG ATIPVVPRRG MVLVTTRMRH
RIFRKVYDAD YVGAVGSNDS DLQTSSVIES TASGTVLIGS SRQMIGFDDC LRVPVLEELA
RKAIDLFPFL RTASVMRVYG GFRPFTPDHL PLIGPDVTVP GLWHANGHEG AGIGLAPATG
EILGALVAGE RPAVDASPYL PDRAALVPAR GVR
|
|---|
| |