| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0080 |
|---|
| Symbol | |
|---|
| ID | 4600053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 90197 |
|---|
| End bp | 91915 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639774691 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_921313 |
|---|
| Protein GI | 119714348 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.740516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGATT CCATCACTGT CGAGGTCATC CGCCACAGCC TCCTGGCGTC GGCCGATGAG
ATGGCGCGCA ACCTGTGCCG GACGGCGTAC AACACCGTGG TCTACGAGAT CCACGACTAC
GGGATCGGGC TGCACGACGC GGCCGGCGAC GTCGTCGCCG ACACGCCGGG CATCGCGATG
TTCACGGGGG CCAACGACGT GGGCATCCGC AACACGATCA AGTTCCTCGG CGAGGACAAC
CTCCACCCGG GCGACGTGTA CTTCCTGAAC TACCCGTACT GGTCGTCGGC GCACACCCTG
GACGCGCTCG TGCTCGCCCC GATCTTCGTG GGGGAGGAGC TCGTCGCGTG GTCGACCTGC
CGGGTCCACC TGCTCGACCT GAAGCAGAAG GACGCGGGCT ACGTGCTCGA CTCCACCGAC
ATGTCGCAGG AAGGCATCTT CTTCCCGTCG GTGAAGCTCT ACGACCGCGG CGTGATCAAC
GACGACATCT TCAACGTGAT CCGGTTCAAC AGCCGGATGC CCGAGCGGAC CATCGGCGAC
ATCCAGGCAC AGGTCTCGGC CTGTCAGACC GGGGAACGCC GGGTCCAGGA GATCGCGGCC
AAGCACGGCG TGGACGTCCT GCGGGAGGCG ATGCGCGAGA TCAACGACCA TGGCGAGCGC
CTGGCGAAGG CCGCGTTGGC GAAGCTGCCG AAGGGCACCT GGTCGGCGTA CGACTTCGTC
GACACCGACG GCGTCGTCAA GGACGAGATG GTCCGGATGG ACGTCACGGT CACCGTCACC
GACGAGAAGA TGATCGTCGA CTGGCGGGAG ACCTCCAGGC CGGCCAAGGG CCCCATCAAC
CTGCCGCGTG GTCTCACGGT GGCCACGACG ATGATGGCCT TCAAGGCGCT CACCACGCCG
GACACTCCGG TGAACTCCGG CAACTTCCGT CCGGTCGAGG TGCTCACGAC GCCCGGTTCG
CTGATGCATG CGGTTGAGCC GATGCCGACG TTCACGATCT GGCCGGCGAT CCTCGCTCCG
GAGGTCATCA ACAAGGCGCT CGCCCAGGGG ATGCCGGACC TGGTCCCGGC GTGCTCGGGT
GGGGACGTCT GCTCGATCAT GGCGCTCGGG GTCGACCCCG AGACGGGGGT CTCGTGGCTG
GAGGCCACGA ACGACGGGGT CGGTTTCGGC GCGCACTCGG GCGGCGACGG GTCGGACGGC
ATCATGCACC TCTCGGAGCC GGGGTGTCGG AACAACCCGA TCGAGATCCT GGAGACCAAG
GCGCCCATGA TCATCGAGAA CTACCGGTAC CGCACCGACT CCGGAGGTCC CGGGAAGTAC
CGCGGTGGCG TCGGCGTGGA ACGCACCTAC CGCTTCCTGG CCCCGTCCTC GGCGATCGTC
ATCAACTACA AGACCAAGAC GAAGCCGTGG GGCATCGGCG AGGGTCGTGA CGGCCTGAAC
AACACGGTCG TGCTCTACCC GGGGACCGAC CGCTCCGTCG AGGTCGGCCA GAGCTACACG
CACTTCGCGA CCAACGAGTG CATGGCCAAC GTCACCGGCG GCGGAGGGGG ATGGGGCGAC
CCGTTCACGC GTGACCCGGC CGCCGTCGCC ACCGACGTGC GGCTCGGGTT CGTCAGCGTC
GAGCGTGCCG CGAGCGACTA CGGCGTCGTG GTCGACCCGG CGACGTACGA CGTCGACGAG
GAGGCCACCC GTCGGTTGCG CTCGGTCGGT GCGTCGTGA
|
|---|
| Protein sequence | MVDSITVEVI RHSLLASADE MARNLCRTAY NTVVYEIHDY GIGLHDAAGD VVADTPGIAM
FTGANDVGIR NTIKFLGEDN LHPGDVYFLN YPYWSSAHTL DALVLAPIFV GEELVAWSTC
RVHLLDLKQK DAGYVLDSTD MSQEGIFFPS VKLYDRGVIN DDIFNVIRFN SRMPERTIGD
IQAQVSACQT GERRVQEIAA KHGVDVLREA MREINDHGER LAKAALAKLP KGTWSAYDFV
DTDGVVKDEM VRMDVTVTVT DEKMIVDWRE TSRPAKGPIN LPRGLTVATT MMAFKALTTP
DTPVNSGNFR PVEVLTTPGS LMHAVEPMPT FTIWPAILAP EVINKALAQG MPDLVPACSG
GDVCSIMALG VDPETGVSWL EATNDGVGFG AHSGGDGSDG IMHLSEPGCR NNPIEILETK
APMIIENYRY RTDSGGPGKY RGGVGVERTY RFLAPSSAIV INYKTKTKPW GIGEGRDGLN
NTVVLYPGTD RSVEVGQSYT HFATNECMAN VTGGGGGWGD PFTRDPAAVA TDVRLGFVSV
ERAASDYGVV VDPATYDVDE EATRRLRSVG AS
|
|---|
| |