Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0061 |
Symbol | |
ID | 4600112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 69064 |
End bp | 69957 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639774675 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_921297 |
Protein GI | 119714332 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAC TGACTGACAC CGAACGCTAC CGACGCAGCC CTGCAGTACC CCATGGCGGC GACCGGCCGC GACGCACCGG GCTGGCCATC ACGGGCGTGG CTGCCTACCT GATCACCTTC ACCATCGTCC TGCCGATCCT GTGGATCGCC CTGCTGTCAT TCCAGCCCAG CGACACGATC CTCTCCGACC CGTTCTCGCT CAACAATCTG ACCTTCGAGA ACTACCGGAA CGCAATTGCC AACCTCCCGT TGGCGCAGAT GTACAAGAAC ACCATCATCG TCGCGCTCGC GTCCGTCACG CTTGGCGCCG TCGTGTCCTT CATGGCTTCG TTCGCGCTCA CCCGAATGGT CTTCCGCCAT AGGCGAGCCC AAGACTCCGT CCGGTTCTAC CTGCTCGCGG GACTCGCCGT ACCGGTCTAC GTGCTGCTCT TCCCGATCTA CCGGCTCGAT CTCGCGCTGG GGATCTTCGG GACCTACGCC GCCTTGATCC TCCCCTACAT CGCGGTGTCC ATCCCCTTCA ACACTCTCCT CATGACCGGG TTCCTCCGGG ACTTCCCGGC CGAGCTGGAG GAGGCCGCGA TCATGGACGG TGCGGGGCTC CTCCGGATCT GCTGGTCGGT GGTGCTTCCG ACGATGAGGC CCGTGATCGC CACGATCCTG ATCTTCAACG TGGTCTACGT GTTCAACGAG TTTCCCTTCG TGTCGATCCT CATCAACGAC CCCGACCTTG CGACGGTGTC GCTCGCCGTA TCGAAGTTCC AGGGGCAGTA CACCGTCGAC TACGGCGGCA TGATGGCAGC GGCCACGCTA GTGCTGCTTC CCCAGCTCGT CATTTATGCC TTCTTCCAGC GCCACGTGAT CGCGGGCCTC ACGGCCGGTG CCGTCAAGGG CTGA
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Protein sequence | MTTLTDTERY RRSPAVPHGG DRPRRTGLAI TGVAAYLITF TIVLPILWIA LLSFQPSDTI LSDPFSLNNL TFENYRNAIA NLPLAQMYKN TIIVALASVT LGAVVSFMAS FALTRMVFRH RRAQDSVRFY LLAGLAVPVY VLLFPIYRLD LALGIFGTYA ALILPYIAVS IPFNTLLMTG FLRDFPAELE EAAIMDGAGL LRICWSVVLP TMRPVIATIL IFNVVYVFNE FPFVSILIND PDLATVSLAV SKFQGQYTVD YGGMMAAATL VLLPQLVIYA FFQRHVIAGL TAGAVKG
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