Gene Noca_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0048 
Symbol 
ID4600099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp54476 
End bp55060 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content73% 
IMG OID639774663 
ProductGntR family transcriptional regulator 
Protein accessionYP_921285 
Protein GI119714320 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGAT TCTGGCGCTA CCTCAGTTCC AGCGCACACG ACGTCTCCCG CAACACGCTG 
CGCGAGGCGT TCCGCCTCCT CGTGCACGAG CGGCTGCTCG TGCACGAGCT CAACCGGGGC 
GTCTTCGTCC GGGAGGCGTC GCTCGACGAG GTCGCCGACC TGTTCCGGTT GCGCCGGGTG 
CTCGAGTGCT CCTCGGTCCG CACCCCGGAA CCGCCCGAGG CCGCGGTGGC GCGGCTCCGG 
TCGGCGGTGT CCGAGGGCGA GACGGCCGCC CGTGAGGGCC AGTGGCAGGA GGTCGGCACC 
GCCAACATGC ACTTCCACCT CGCGGTGGGG GCCCTCGCCG GGAGCCCCCG GATCGACGAG 
TTGATGGAGC AGCTGATGGC GGAGCTGCGC CTGGTCTTCC ACGTGATGGC GGCGCCCCAG 
AAGTTCCACG CGCCCTACCT CGAGGACAAC GCCCGGATCT GCGCCCTCGT CCAGGCCGGC 
CGCGGCGAGG AGGCCGCGGC GCTGCTCGAC ACCTACCTGG CGCGCGCCGA GCGGCAGCTG 
GTCCAGGCGT ACCGGCTCGT CGCCCACGCG ACGGCCAGCG CGTAG
 
Protein sequence
MFGFWRYLSS SAHDVSRNTL REAFRLLVHE RLLVHELNRG VFVREASLDE VADLFRLRRV 
LECSSVRTPE PPEAAVARLR SAVSEGETAA REGQWQEVGT ANMHFHLAVG ALAGSPRIDE 
LMEQLMAELR LVFHVMAAPQ KFHAPYLEDN ARICALVQAG RGEEAAALLD TYLARAERQL 
VQAYRLVAHA TASA